RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ABRQ12979 859 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 DHCR24Q15392 516 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 NR6A1Q15406 480 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 RABL3Q5HYI8 236 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 GPRC6AQ5T6X5 926 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 KANK2Q63ZY3 851 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 C16orf89Q6UX73 402 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 GDPD4Q6W3E5 623 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 CPSF7Q8N684 471 aaKnown RBP12.38□□□□□ -0.43
LIMK1-201ENST00000336180 PPFIBP2Q8ND30 876 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 RHEBL1Q8TAI7 183 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 SCRN2Q96FV2 425 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 LMLNQ96KR4 655 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 DUS2Q9NX74 493 aaKnown RBP12.38□□□□□ -0.43
LIMK1-201ENST00000336180 ERVW-1Q9UQF0 538 aa12.38□□□□□ -0.43
LIMK1-201ENST00000336180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 A0A1B0GVG6 124 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 SYCE1LA8MT33 242 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 OR7A17O14581 309 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 NRP2O60462 931 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 SYNCRIPO60506 623 aaKnown RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 EFCAB14O75071 495 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 RPS17P08708 135 aaKnown RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 SQLEQ14534 574 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 PIGGQ5H8A4 983 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 MILR1Q7Z6M3 343 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 IQCF2Q8IXL9 164 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 C2orf73Q8N5S3 287 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 GFM2Q969S9 779 aaKnown RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 ZNF707Q96C28 371 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 COPS8Q99627 209 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 RABL2AQ9UBK7 228 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 MYOCOSA0A1B0GUC4 107 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 H3BNX3 289 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 LMNAP02545 664 aaKnown RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 GTF2H2Q13888 395 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 ZNF77Q15935 545 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 CRY1Q16526 586 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 CCSMST1Q4G0I0 132 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 RARS2Q5T160 578 aaKnown RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 ANO7Q6IWH7 933 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 GTF2H2CQ6P1K8 395 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 AMIGO2Q86SJ2 522 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 UBAP1Q9NZ09 502 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 ANGPTL2Q9UKU9 493 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 POLR3HQ9Y535 204 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 ZNF839A8K0R7 811 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 K7ESM1 405 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 S100BP04271 92 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 CYP17A1P05093 508 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 NELFEP18615 380 aaKnown RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 CDC16Q13042 620 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 PAGE3Q5JUK9 113 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 DHDDSQ86SQ9 333 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 RALGPS2Q86X27 583 aaPredicted RBP12.37□□□□□ -0.43
LIMK1-201ENST00000336180 PHYKPLQ8IUZ5 450 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 STK40Q8N2I9 435 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 SFRP1Q8N474 314 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 CDC26Q8NHZ8 85 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 ARL15Q9NXU5 204 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 MAP10Q9P2G4 905 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 GNPTGQ9UJJ9 305 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 PCDHGB4Q9UN71 923 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 HS3ST2Q9Y278 367 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 PCDHGB5Q9Y5G0 923 aa12.37□□□□□ -0.43
LIMK1-201ENST00000336180 RSL1D1O76021 490 aaKnown RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 POP4O95707 220 aaKnown RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 LATS1O95835 1130 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 MTHFD1P11586 935 aaKnown RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 LBPP18428 481 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 EFNA1P20827 205 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 ME2P23368 584 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 IL12AP29459 219 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 NFKB2Q00653 900 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 GPM6BQ13491 265 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 DDX39BQ13838 428 aaKnown RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 PTGR1Q14914 329 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 ACOX1Q15067 660 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 ZXDCQ2QGD7 858 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 RFTN2Q52LD8 501 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 SLC2A7Q6PXP3 512 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 CHSY3Q70JA7 882 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 PGAM4Q8N0Y7 254 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 LILRA2Q8N149 483 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 OR56A4Q8NGH8 313 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 RIMKLBQ9ULI2 386 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 FAM149AA5PLN7 773 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 LOC730098B7Z3J9 87 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 H7C0S8 307 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 TULP3O75386 442 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 ATP5BP06576 529 aaKnown RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 HMOX2P30519 316 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 SLC26A3P40879 764 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 DGKGP49619 791 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 CCNG1P51959 295 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 CTSCP53634 463 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 RPL38P63173 70 aaKnown RBP12.36□□□□□ -0.43
LIMK1-201ENST00000336180 LRP8Q14114 963 aa12.36□□□□□ -0.43
LIMK1-201ENST00000336180 IL23RQ5VWK5 629 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms