RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ITM2CQ9NQX7 267 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF358Q9NW07 568 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 CFAP20Q9Y6A4 193 aaKnown RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 NHSL1Q5SYE7 1610 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 C9JVG2 144 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 OR10H3O60404 316 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 F7P08709 466 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 ATP1B2P14415 290 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 BMP7P18075 431 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 VIPR2P41587 438 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 ARRB1P49407 418 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 C1QTNF8P60827 252 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 IGSF8Q969P0 613 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 SLC22A18Q96BI1 424 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 OSBPL10Q9BXB5 764 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 SAMHD1Q9Y3Z3 626 aaKnown RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 PCDHGA4Q9Y5G9 962 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 TNFP01375 233 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 RPL10P27635 214 aaKnown RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 DEFB103AP81534 67 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 VPS26BQ4G0F5 336 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 DEFB119Q8N690 84 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 HHIPL1Q96JK4 782 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 VPS35Q96QK1 796 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 CCM2Q9BSQ5 444 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 EBPLQ9BY08 206 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 SSU72Q9NP77 194 aaKnown RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 CYTH4Q9UIA0 394 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 PPIEQ9UNP9 301 aaKnown RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 GLI3P10071 1580 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 hCG_2014768A0A024R1R8 64 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 KLF8O95600 359 aaPredicted RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 CREB1P16220 341 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 RPL26P61254 145 aaKnown RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 SCAIQ8N9R8 606 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 HOPXQ9BPY8 73 aaPredicted RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 SLC24A3Q9HC58 644 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 ZDHHC18Q9NUE0 388 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 GJD2Q9UKL4 321 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 RPL26L1Q9UNX3 145 aaKnown RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 CST1P01037 141 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 MSX2P35548 267 aaPredicted RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 HEPACAMQ14CZ8 416 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 KHDRBS2Q5VWX1 349 aaKnown RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 METTL21CQ5VZV1 264 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 NET1Q7Z628 596 aaPredicted RBP14.79□□□□□ -0.04
C9orf47-201ENST00000334490 BANPQ8N9N5 519 aa14.79□□□□□ -0.04
C9orf47-201ENST00000334490 DHRS12A0PJE2 317 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 PIP5K1BO14986 540 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 LEFTY1O75610 366 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 DEFA1P59665 94 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 DEFA3P59666 94 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 KCNJ2P63252 427 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 NTHL1P78549 312 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 ZIK1Q3SY52 487 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 MARCH8Q5T0T0 291 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 LRRTM3Q86VH5 581 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 STRA6Q9BX79 667 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 TMLHEQ9NVH6 421 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 PRPF19Q9UMS4 504 aaKnown RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 KCNK6Q9Y257 313 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 LTBP4Q8N2S1 1624 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 JAK1P23458 1154 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 CST5P28325 142 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 SOX6P35712 828 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 WDR5P61964 334 aaKnown RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 IRF9Q00978 393 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 DPY19L3Q6ZPD9 716 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 FBXW8Q8N3Y1 598 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 TTC9BQ8N6N2 239 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF248Q8NDW4 579 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 FETUBQ9UGM5 382 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 PRKAB1Q9Y478 270 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 MYH11P35749 1972 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 HAS3O00219 553 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 MYL12BO14950 172 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 MATN4O95460 622 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 CYP11A1P05108 521 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 CDC42P60953 191 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 SPIBQ01892 262 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 TFGQ92734 400 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 ARL8BQ9NVJ2 186 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 C1orf109Q9NX04 203 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 SEC14L3Q9UDX4 400 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 CXorf49A8MYA2 514 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 M0QZQ0 153 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 SOCS7O14512 581 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 KAT7O95251 611 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 ITGBL1O95965 494 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 PAK4O96013 591 aaPredicted RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 AHSGP02765 367 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 CCDC159P0C7I6 412 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 HSD17B2P37059 387 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF598Q86UK7 904 aaKnown RBP14.78□□□□□ -0.04
C9orf47-201ENST00000334490 UMODL1-AS1Q8N2C9 162 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 SVOPQ8N4V2 548 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 TMEM145Q8NBT3 493 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF563Q8TA94 476 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 NECTIN4Q96NY8 510 aa14.78□□□□□ -0.04
C9orf47-201ENST00000334490 RTKNQ9BST9 563 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms