RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 OR2M4Q96R27 311 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 SLC13A1Q9BZW2 595 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 CAPN10Q9HC96 672 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 TBC1D29Q9UFV1 150 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 ADAMTS6Q9UKP5 1117 aa16.2■□□□□ 0.18
SHOX-201ENST00000334060 NOVA2Q9UNW9 492 aaKnown RBP16.2■□□□□ 0.18
SHOX-201ENST00000334060 CFAP54Q96N23 3096 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 A0A096LPK6 155 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 OR52A4PA6NMU1 304 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 RALBP11234 206 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 ZNF37AP17032 561 aaPredicted RBP16.19■□□□□ 0.18
SHOX-201ENST00000334060 TYK2P29597 1187 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 RAB10P61026 200 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 ARHGAP8P85298 464 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 GTF2H3Q13889 308 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 CCSMST1Q4G0I0 132 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 RAPH1Q70E73 1250 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 NXNL1Q96CM4 212 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 SH3GL2Q99962 352 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 CCM2Q9BSQ5 444 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 CCDC68Q9H2F9 335 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 COG4Q9H9E3 785 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 GPAMQ9HCL2 828 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 ACSS2Q9NR19 701 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 IGSF5Q9NSI5 407 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 SPATS2LQ9NUQ6 558 aaKnown RBP16.19■□□□□ 0.18
SHOX-201ENST00000334060 APOBEC3BQ9UH17 382 aaKnown RBP16.19■□□□□ 0.18
SHOX-201ENST00000334060 PCDHB1Q9Y5F3 818 aa16.19■□□□□ 0.18
SHOX-201ENST00000334060 SLC5A10A0PJK1 596 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 CDC7O00311 574 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 RGS16O15492 202 aaPredicted RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 KRT4P19013 534 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 C21orf59P57076 290 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 CSHL1Q14406 222 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 FBXO48Q5FWF7 155 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 OTOAQ7RTW8 1153 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 ZBTB2Q8N680 514 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 JPH3Q8WXH2 748 aaPredicted RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 ATOH1Q92858 354 aaPredicted RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 ISL2Q96A47 359 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 PTERQ96BW5 349 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 MOCOSQ96EN8 888 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 LINGO1Q96FE5 620 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 ROPN1BQ9BZX4 212 aaPredicted RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 ROPN1Q9HAT0 212 aaPredicted RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 DHRS7Q9Y394 339 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 ARHGEF17Q96PE2 2063 aaPredicted RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 ZFC3H1O60293 1989 aaKnown RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 ZBTB14O43829 449 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 GPC4O75487 556 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 KRT38O76015 456 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 AP2A2O94973 939 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 EPN2O95208 641 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 CSF2P04141 144 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 CCDC166P0CW27 439 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 STMN1P16949 149 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 NUDT1P36639 197 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 ACTR1BP42025 376 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 ACTR1AP61163 376 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 POU4F1Q01851 419 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 PDAP1Q13442 181 aaKnown RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 CLCA4Q14CN2 919 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 HLA-BQ31612 363 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 CYHR1Q6ZMK1 362 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 AMZ2Q86W34 360 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 OXR1Q8N573 874 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 OR2L2Q8NH16 312 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 GPR78Q96P69 363 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 TTC1Q99614 292 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 ZCCHC2Q9C0B9 1178 aaKnown RBP16.18■□□□□ 0.18
SHOX-201ENST00000334060 GPR34Q9UPC5 381 aa16.18■□□□□ 0.18
SHOX-201ENST00000334060 IQANK1A0A1B0GTG1 560 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 SHOX2O60902 331 aaPredicted RBP16.17■□□□□ 0.18
SHOX-201ENST00000334060 VPS26AO75436 327 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 KRT37O76014 449 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 NME1P15531 152 aaKnown RBP16.17■□□□□ 0.18
SHOX-201ENST00000334060 SERPINB9P50453 376 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 MAGOHP61326 146 aaKnown RBP16.17■□□□□ 0.18
SHOX-201ENST00000334060 ABRQ12979 859 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 GBX1Q14549 363 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 DEFB133Q30KQ1 61 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 MBOAT1Q6ZNC8 495 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 IQCHQ86VS3 1027 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 SLC25A45Q8N413 288 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 PHC3Q8NDX5 983 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 CFAP61Q8NHU2 1237 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 LMX1AQ8TE12 382 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 HEXDCQ8WVB3 486 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 LINC00615Q96LM1 132 aaPredicted RBP16.17■□□□□ 0.18
SHOX-201ENST00000334060 RMDN2Q96LZ7 410 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 MLXIPLQ9NP71 852 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 PARD6AQ9NPB6 346 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 TAS2R13Q9NYV9 303 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 TRMT6Q9UJA5 497 aaKnown RBP16.17■□□□□ 0.18
SHOX-201ENST00000334060 GMEB2Q9UKD1 530 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 EMCNQ9ULC0 261 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 DGKBQ9Y6T7 804 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 NPEPPSL1A6NEC2 478 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 MGAT4DA6NG13 374 aa16.17■□□□□ 0.18
SHOX-201ENST00000334060 KMOO15229 486 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms