RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 METRNLQ641Q3 311 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 ABRAXAS1Q6UWZ7 409 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 CCNI2Q6ZMN8 369 aaPredicted RBP20.11■□□□□ 0.81
MRPL40-201ENST00000333130 C3orf62Q6ZUJ4 267 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 GALNT7Q86SF2 657 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 C17orf82Q86X59 251 aaPredicted RBP20.11■□□□□ 0.81
MRPL40-201ENST00000333130 DENND6AQ8IWF6 608 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 GSPT2Q8IYD1 628 aaKnown RBP20.11■□□□□ 0.81
MRPL40-201ENST00000333130 CFAP206Q8IYR0 622 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 C2CD4AQ8NCU7 369 aaPredicted RBP20.11■□□□□ 0.81
MRPL40-201ENST00000333130 PATE1Q8WXA2 126 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 ELMO1Q92556 727 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 LPGAT1Q92604 370 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 CCDC3Q9BQI4 270 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.11■□□□□ 0.81
MRPL40-201ENST00000333130 P2RY12Q9H244 342 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 CCDC68Q9H2F9 335 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 SYNDIG1Q9H7V2 258 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 SARS2Q9NP81 518 aaKnown RBP20.11■□□□□ 0.81
MRPL40-201ENST00000333130 IARS2Q9NSE4 1012 aaKnown RBP20.11■□□□□ 0.81
MRPL40-201ENST00000333130 NINJ2Q9NZG7 142 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 UNC13CQ8NB66 2214 aa20.11■□□□□ 0.81
MRPL40-201ENST00000333130 PRR19A6NJB7 356 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 LIN7AO14910 233 aaPredicted RBP20.1■□□□□ 0.81
MRPL40-201ENST00000333130 VIPP01282 170 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 RPS3P23396 243 aaKnown RBP eCLIP20.1■□□□□ 0.817e-16■■■□□ 19
MRPL40-201ENST00000333130 GPR3P46089 330 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 PPM1FP49593 454 aaPredicted RBP20.1■□□□□ 0.81
MRPL40-201ENST00000333130 EIF3BP55884 814 aaKnown RBP20.1■□□□□ 0.81
MRPL40-201ENST00000333130 FOXC1Q12948 553 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 RPA4Q13156 261 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 TMED2Q15363 201 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 TEDDM1Q5T9Z0 273 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 DHRS13Q6UX07 377 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 CAPN12Q6ZSI9 719 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 KIAA0408Q6ZU52 694 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 NAT14Q8WUY8 206 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 SLC38A3Q99624 504 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 FUT8Q9BYC5 575 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 COG4Q9H9E3 785 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 CPNE7Q9UBL6 633 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 FBXO5Q9UKT4 447 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 PRSS21Q9Y6M0 314 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 RNF215Q9Y6U7 377 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 PTPRBP23467 1997 aa20.1■□□□□ 0.81
MRPL40-201ENST00000333130 TRBV23OR9-2A0A075B6M9 112 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 IFRD1O00458 451 aaPredicted RBP20.09■□□□□ 0.81
MRPL40-201ENST00000333130 KPNA5O15131 536 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 ESR1P03372 595 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 ADRB1P08588 477 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 XRCC1P18887 633 aaPredicted RBP20.09■□□□□ 0.81
MRPL40-201ENST00000333130 STX2P32856 288 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 CTBP1Q13363 440 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 BOP1Q14137 746 aaKnown RBP20.09■□□□□ 0.81
MRPL40-201ENST00000333130 KYNUQ16719 465 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 PERM1Q5SV97 790 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 RBM12BQ8IXT5 1001 aaKnown RBP20.09■□□□□ 0.81
MRPL40-201ENST00000333130 TMEM159Q96B96 161 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 ZMYND15Q9H091 742 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 POT1Q9NUX5 634 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 PSMD13Q9UNM6 376 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 HEBP2Q9Y5Z4 205 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 KNTC1P50748 2209 aa20.09■□□□□ 0.81
MRPL40-201ENST00000333130 FAM159BA6NKW6 160 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 OPA1O60313 960 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 EML2O95834 649 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 MCM3P25205 808 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 LEPRP48357 1165 aaKnown RBP20.08■□□□□ 0.81
MRPL40-201ENST00000333130 MPP1Q00013 466 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 SPIDRQ14159 915 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 ZNF658BQ4V348 819 aaPredicted RBP20.08■□□□□ 0.81
MRPL40-201ENST00000333130 ZNF789Q5FWF6 425 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 UBAP2Q5T6F2 1119 aaKnown RBP20.08■□□□□ 0.81
MRPL40-201ENST00000333130 FAM83HQ6ZRV2 1179 aaPredicted RBP20.08■□□□□ 0.81
MRPL40-201ENST00000333130 ZNF438Q7Z4V0 828 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 RAB44Q7Z6P3 723 aaPredicted RBP20.08■□□□□ 0.81
MRPL40-201ENST00000333130 TMPRSS12Q86WS5 348 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 SFTPA2Q8IWL1 248 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 BIRC8Q96P09 236 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 SMYD2Q9NRG4 433 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 ZFATQ9P243 1243 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 SLC17A6Q9P2U8 582 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 RAB21Q9UL25 225 aa20.08■□□□□ 0.81
MRPL40-201ENST00000333130 E5RI56 91 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 TCEA3O75764 348 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 APOA4P06727 396 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 GABRB3P28472 473 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 ALDH4A1P30038 563 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 KRT33BQ14525 404 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 NR1D2Q14995 579 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 HES3Q5TGS1 186 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 TRMT10CQ7L0Y3 403 aaKnown RBP20.08■□□□□ 0.8
MRPL40-201ENST00000333130 SPRED1Q7Z699 444 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 SLC26A11Q86WA9 606 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 Q8N9G6 341 aaPredicted RBP20.08■□□□□ 0.8
MRPL40-201ENST00000333130 ASZ1Q8WWH4 475 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 AHCYL2Q96HN2 611 aaKnown RBP20.08■□□□□ 0.8
MRPL40-201ENST00000333130 C12orf66Q96MD2 445 aa20.08■□□□□ 0.8
MRPL40-201ENST00000333130 GFM1Q96RP9 751 aaKnown RBP20.08■□□□□ 0.8
MRPL40-201ENST00000333130 PARD6BQ9BYG5 372 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms