RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.27□□□□□ -1.09
SKA2-201ENST00000330137 FAM181AQ8N9Y4 354 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 ZNF540Q8NDQ6 660 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 SYTL5Q8TDW5 730 aaPredicted RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 SH3KBP1Q96B97 665 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CRELD1Q96HD1 420 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 TTYH2Q9BSA4 534 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 NIFKQ9BYG3 293 aaKnown RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 CEP41Q9BYV8 373 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 ROGDIQ9GZN7 287 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.27□□□□□ -1.09
SKA2-201ENST00000330137 KLHL8Q9P2G9 620 aaPredicted RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 POLLQ9UGP5 575 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 TMEFF2Q9UIK5 374 aaPredicted RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 FZD10Q9ULW2 581 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 DNAJC15Q9Y5T4 150 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 MFSD11O43934 449 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 MAP3K6O95382 1288 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CD4P01730 458 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 NCK1P16333 377 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CES1P23141 567 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 PTPN3P26045 913 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 ARNTP27540 789 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CSTF2P33240 577 aaKnown RBP eCLIP8.27□□□□□ -1.09
SKA2-201ENST00000330137 DCTP40126 519 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 SCNN1GP51170 649 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 TFAMQ00059 246 aaKnown RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 PRKCEQ02156 737 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 SCN1BQ07699 218 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 KYAT1Q16773 422 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 ARMC4Q5T2S8 1044 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 NXNL2Q5VZ03 156 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 TIGD7Q6NT04 549 aaPredicted RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 NRARPQ7Z6K4 114 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 SLC51AQ86UW1 340 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 KRT73Q86Y46 540 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 KIF18BQ86Y91 864 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 DNAJB8Q8NHS0 232 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 DNAJB14Q8TBM8 379 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 BRSK1Q8TDC3 778 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 TWIST2Q8WVJ9 160 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 DEDD2Q8WXF8 326 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 MYDGFQ969H8 173 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 KIAA1143Q96AT1 154 aaPredicted RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 PITX2Q99697 317 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 OMDQ99983 421 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 TTLL2Q9BWV7 592 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 PLSCR3Q9NRY6 295 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 PTTG3PQ9NZH4 202 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 SRRDQ9UH36 339 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 NDRG4Q9ULP0 352 aaKnown RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 PCDHB14Q9Y5E9 798 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CCDC182A6NF36 153 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 UBFD1O14562 309 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 GNGT2O14610 69 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 HS6ST1O60243 411 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 SLC22A3O75751 556 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 EPN2O95208 641 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 CYBBP04839 570 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 IFNA16P05015 189 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 NR3C2P08235 984 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 ALDH4A1P30038 563 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 HLA-FP30511 346 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 MAP2K4P45985 399 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 ZFP36L2P47974 494 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 POLR2JP52435 117 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 SOX10P56693 466 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 DSTNP60981 165 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 RAPSNQ13702 412 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 EIF4HQ15056 248 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 RAB6CQ53S08 254 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 RABL3Q5HYI8 236 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 NOL9Q5SY16 702 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 KIAA0930Q6ICG6 404 aaPredicted RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 JADE1Q6IE81 842 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 ABHD15Q6UXT9 468 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 SH3BP5LQ7L8J4 393 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 DTWD1Q8N5C7 304 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 KLHL6Q8WZ60 621 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 C3orf30Q96M34 536 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 HEXIM2Q96MH2 286 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 TM9SF2Q99805 663 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 PDCD2LQ9BRP1 358 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 MRPL9Q9BYD2 267 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 RAB6CQ9H0N0 254 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 PRDM12Q9H4Q4 367 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 SMURF2Q9HAU4 748 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 ZBTB20Q9HC78 741 aaPredicted RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 FBRSL1Q9HCM7 1045 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 TNFRSF12AQ9NP84 129 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 TIGARQ9NQ88 270 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 HMGXB4Q9UGU5 601 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 AAR2Q9Y312 384 aaKnown RBP8.26□□□□□ -1.09
SKA2-201ENST00000330137 COL1A2P08123 1366 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 MUSKO15146 869 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 PROM1O43490 865 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 XPNPEP2O43895 674 aa8.26□□□□□ -1.09
SKA2-201ENST00000330137 WISP3O95389 354 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms