RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 COL4A1P02462 1669 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 UBXN8O00124 270 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 SLC28A1O00337 649 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 MAFKO60675 156 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 CLDN9O95484 217 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 VARSP26640 1264 aaKnown RBP14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 RPL3P39023 403 aaKnown RBP14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 FLOT2Q14254 428 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 ICE2Q659A1 982 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 CLHC1Q8NHS4 586 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 MIPEPQ99797 713 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 NDC1Q9BTX1 674 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 ALKBH4Q9NXW9 302 aa14.19□□□□□ -0.14
SYNGR1-203ENST00000328933 KHNYNO15037 678 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 HNRNPCL1O60812 293 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 EPN2O95208 641 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MANFP55145 182 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 ALKBH2Q6NS38 261 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 GPR180Q86V85 440 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 C10orf107Q8IVU9 208 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 POU5F2Q8N7G0 328 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 SMPDL3AQ92484 453 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 CNDP1Q96KN2 507 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 ASB16Q96NS5 453 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 LENG8Q96PV6 779 aaPredicted RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 GAL3ST4Q96RP7 486 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MYADMQ96S97 322 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 CNPPD1Q9BV87 410 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 DDX18Q9NVP1 670 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 AVPR1BP47901 424 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 STXBP1P61764 594 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 SLC13A2Q13183 592 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 PPCDCQ96CD2 204 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 CHFRQ96EP1 664 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 IMP4Q96G21 291 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MECRQ9BV79 373 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 ANKHQ9HCJ1 492 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 EQTNQ9NQ60 294 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 NUDT4Q9NZJ9 180 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 TAC3Q9UHF0 121 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 CDC14AQ9UNH5 594 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MYO18AQ92614 2054 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 TRAFD1O14545 582 aaPredicted RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MRASO14807 208 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 COL6A2P12110 1019 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 POU1F1P28069 291 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MAPKAPK3Q16644 382 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 ZNF648Q5T619 568 aaPredicted RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 SULT1C3Q6IMI6 304 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 CDX2Q99626 313 aaPredicted RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 RTP3Q9BQQ7 232 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 IL21RQ9HBE5 538 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MAGEE1Q9HCI5 957 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 ACTL7BQ9Y614 415 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 KIAA1161Q6NSJ0 714 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 KIF2BQ8N4N8 673 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 HM13Q8TCT9 377 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 LRCH3Q96II8 777 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MARK4Q96L34 752 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 TDRD1Q9BXT4 1180 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 RERGLQ9H628 205 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 FTSJ1Q9UET6 329 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 ZNF232Q9UNY5 417 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 MAPRE3Q9UPY8 281 aa14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 RRP15Q9Y3B9 282 aaKnown RBP14.18□□□□□ -0.14
SYNGR1-203ENST00000328933 GTPBP1O00178 669 aaKnown RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 UMPSP11172 480 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 H2AFXP16104 143 aaPredicted RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 TARSP26639 723 aaKnown RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 ITPKBP27987 946 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 LRRC36Q1X8D7 754 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 DCAF12L1Q5VU92 463 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 CYP4Z1Q86W10 505 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 KRT73Q86Y46 540 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 GPR65Q8IYL9 337 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 FBXO15Q8NCQ5 510 aaPredicted RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 OR2T34Q8NGX1 318 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 OXNAD1Q96HP4 312 aaPredicted RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 CRISPLD1Q9H336 500 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 SLC17A6Q9P2U8 582 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 TRAF6Q9Y4K3 522 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 TMEM150CB9EJG8 249 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 LIN7AO14910 233 aaPredicted RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 PDHA1P08559 390 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 MAPK12P53778 367 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 FRG1Q14331 258 aaKnown RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 R3HCC1LQ7Z5L2 792 aaKnown RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 FIG4Q92562 907 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 UHRF1Q96T88 793 aaPredicted RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 MTERF1Q99551 399 aaKnown RBP14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 TRMOQ9BU70 441 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 CDH22Q9UJ99 828 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 TK2O00142 265 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 PEX12O00623 359 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 NR2F1P10589 423 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 TNFRSF4P43489 277 aa14.17□□□□□ -0.14
SYNGR1-203ENST00000328933 CLDN2P57739 230 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms