RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TNRC6BQ9UPQ9 1833 aaKnown RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 UQCRHLA0A096LP55 91 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ESYT3A0FGR9 886 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 RHPN2P1A8MT19 583 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 PDZK1P1A8MUH7 402 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 FADS2P1A8MWK0 482 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 GAPDHSO14556 408 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 HGSO14964 777 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 PRPF4O43172 522 aaKnown RBP eCLIP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 DUX1O43812 170 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 LDOC1O95751 146 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 UQCRHP07919 91 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ANXA5P08758 320 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 PIRTP0C851 137 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 TPBGLP0DKB5 382 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 MTHFD1P11586 935 aaKnown RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ZNF8P17098 575 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 MAGEA12P43365 314 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 IRX4P78413 519 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 EIF2B5Q13144 721 aaKnown RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 FGL2Q14314 439 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 KIR2DS3Q14952 304 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ZKSCAN8Q15776 578 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 KBTBD12Q3ZCT8 623 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 TMTC4Q5T4D3 741 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ANKS6Q68DC2 871 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 PRR23CQ6ZRP0 262 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 LRRC70Q7Z2Q7 622 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 SUMF1Q8NBK3 374 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 TTLQ8NG68 377 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 UBTD2Q8WUN7 234 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 RLN3Q8WXF3 142 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 FCRL4Q96PJ5 515 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 STRADBQ9C0K7 418 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 DRC3Q9H069 523 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 OR6C2Q9NZP2 312 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 GGT7Q9UJ14 662 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 MAPRE3Q9UPY8 281 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 A0A1B0GVT2 93 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 FAM86C2PA6NEL3 165 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 STX16-NPEPL1H3BU86 382 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 STX16O14662 325 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 GIPC1O14908 333 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 INPP4BO15327 924 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 TNFSF14O43557 240 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 NUDT21O43809 227 aaKnown RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 SNX2O60749 519 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 KATNA1O75449 491 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 GPC4O75487 556 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 SOD1P00441 154 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ERVK-10P10266 1014 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ACTR1BP42025 376 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 GRIA1P42261 906 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ARSDP51689 593 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ACTR1AP61163 376 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 DAB2P98082 770 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ZNF438Q7Z4V0 828 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 CACUL1Q86Y37 369 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 PARP9Q8IXQ6 854 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ZNF655Q8N720 491 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 RASGEF1AQ8N9B8 481 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ZNF548Q8NEK5 533 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 LMX1AQ8TE12 382 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 ZDHHC1Q8WTX9 485 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 OR1E3Q8WZA6 343 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 SMPDL3AQ92484 453 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 SCAMP4Q969E2 229 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 FAR2Q96K12 515 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 FCRL3Q96P31 734 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-201ENST00000327908 MIPEPQ99797 713 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 CCT7Q99832 543 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 BOCQ9BWV1 1114 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 NLNQ9BYT8 704 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 SLC6A17Q9H1V8 727 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 GAREM1Q9H706 876 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 FANCEQ9HB96 536 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 PARVBQ9HBI1 364 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 GPAMQ9HCL2 828 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 SEMA4GQ9NTN9 838 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 PLAAQ9Y263 795 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 COQ6Q9Y2Z9 468 aa5.07□□□□□ -1.6
LRIT3-201ENST00000327908 TTC24A2A3L6 582 aaPredicted RBP5.06□□□□□ -1.6
LRIT3-201ENST00000327908 CCDC78A2IDD5 438 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 COPEO14579 308 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 KLHL2O95198 593 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 GLB1P16278 677 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 ITPKAP23677 461 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 FMO4P31512 558 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 ARFIP1P53367 373 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 GPX6P59796 221 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 TGM3Q08188 693 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 TCF15Q12870 199 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 BOP1Q14137 746 aaKnown RBP5.06□□□□□ -1.6
LRIT3-201ENST00000327908 MSS51Q4VC12 460 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 CAPRIN2Q6IMN6 1127 aaKnown RBP5.06□□□□□ -1.6
LRIT3-201ENST00000327908 PLXDC1Q8IUK5 500 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 KIAA1191Q96A73 305 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 FBXL8Q96CD0 374 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 ZDHHC12Q96GR4 267 aa5.06□□□□□ -1.6
LRIT3-201ENST00000327908 APOPT1Q96IL0 206 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms