RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 FAM110BQ8TC76 370 aa12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 NMD3Q96D46 503 aaKnown RBP12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 ZNF670Q9BS34 389 aa12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 PCBD2Q9H0N5 130 aa12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 PCYOX1Q9UHG3 505 aa12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 PTGES3LE9PB15 166 aa12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 YBEYP58557 167 aaPredicted RBP12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 RAB10P61026 200 aa12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 RPL7AP62424 266 aaKnown RBP12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 ZNF276Q8N554 614 aa12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 TSSK3Q96PN8 268 aa12.16□□□□□ -0.46
CACNA1F-201ENST00000323022 MYADML2A6NDP7 307 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 HNRNPA1P09651 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 AQP1P29972 269 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 ST3GAL1Q11201 340 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 CHAF1BQ13112 559 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 ATP1A4Q13733 1029 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 SLC36A4Q6YBV0 504 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 ZNF730Q6ZMV8 503 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 OAFQ86UD1 273 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 ETNPPLQ8TBG4 499 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 TSEN15Q8WW01 171 aaKnown RBP12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 AZIN2Q96A70 460 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 GPR21Q99679 349 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 UBAP1Q9NZ09 502 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 CORO2BQ9UQ03 480 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 SHPRHQ149N8 1683 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 STX16-NPEPL1H3BU86 382 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 STX16O14662 325 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 SNAP91O60641 907 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 PRAMEF14Q5SWL7 426 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 ZDHHC13Q8IUH4 622 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 DNAAF1Q8NEP3 725 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 FUBP3Q96I24 572 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 NELL2Q99435 816 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 EBPLQ9BY08 206 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 SDHAF3Q9NRP4 125 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 PTGFRNQ9P2B2 879 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 PCDHGB5Q9Y5G0 923 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 CILPO75339 1184 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 CER1O95813 267 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 PKMP14618 531 aaKnown RBP12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 EPCAMP16422 314 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 UGT2B15P54855 530 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 AIF1P55008 147 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 NAB1Q13506 487 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 P2RY11Q96G91 374 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 RASSF1Q9NS23 344 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 B4GALT7Q9UBV7 327 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 BTBD3Q9Y2F9 522 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 LTBP3Q9NS15 1303 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 PARP4Q9UKK3 1724 aaKnown RBP12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 BANF1O75531 89 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 CCR3P51677 355 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 ZNF41P51814 821 aaPredicted RBP12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 NTHL1P78549 312 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 RBPJQ06330 500 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 MSLNQ13421 630 aaPredicted RBP12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 MZT2BQ6NZ67 158 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 CLNKQ7Z7G1 428 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 PYROXD2Q8N2H3 581 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 LRRN4CLQ8ND94 238 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 OR2L5Q8NG80 312 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 ARMC5Q96C12 935 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 C9orf16Q9BUW7 83 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 IKZF4Q9H2S9 585 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 RARRES3Q9UL19 164 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 MED31Q9Y3C7 131 aa12.15□□□□□ -0.46
CACNA1F-201ENST00000323022 PTPN4P29074 926 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 FOXC1Q12948 553 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 ALG1LQ6GMV1 187 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 PAOXQ6QHF9 649 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 PRICKLE1Q96MT3 831 aaPredicted RBP12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 NOL6Q9H6R4 1146 aaKnown RBP12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 CLN6Q9NWW5 311 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 MORF4L1Q9UBU8 362 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 SEC14L3Q9UDX4 400 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 DGKBQ9Y6T7 804 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 MFSD11O43934 449 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 ZNF823P16415 610 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 GRIA2P42262 883 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 RPS21P63220 83 aaKnown RBP12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 FRG1Q14331 258 aaKnown RBP12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 ZNF846Q147U1 533 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 TIMM50Q3ZCQ8 353 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 ZNF549Q6P9A3 640 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 GALNTL5Q7Z4T8 443 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 STX12Q86Y82 276 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 TCAIMQ8N3R3 496 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 OR52E6Q96RD3 313 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 ACOT7O00154 380 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 CDC7O00311 574 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 IRAK2O43187 625 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 OR5F1O95221 314 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 PGM3O95394 542 aa12.14□□□□□ -0.47
CACNA1F-201ENST00000323022 SEMA4FO95754 770 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms