RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CCR3P51677 355 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 SREBF2Q12772 1141 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CTTNQ14247 550 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 C15orf59Q2T9L4 293 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 MYLK3Q32MK0 819 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 PAPPA-AS1Q5QFB9 102 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CAVIN1Q6NZI2 390 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 MFSD6Q6ZSS7 791 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 STOX1Q6ZVD7 989 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 HIST3H2AQ7L7L0 130 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 SHFQ7M4L6 423 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CAMKMTQ7Z624 323 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 SNX32Q86XE0 403 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 ARID3BQ8IVW6 561 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF595Q8IYB9 648 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 THNSL1Q8IYQ7 743 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 GUF1Q8N442 669 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 FBXO39Q8N4B4 442 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CNBD1Q8NA66 436 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 OR1J2Q8NGS2 313 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CFAP61Q8NHU2 1237 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 RHBDF1Q96CC6 855 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 FAM84BQ96KN1 310 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 GFM1Q96RP9 751 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 NAA11Q9BSU3 229 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 C1QTNF1Q9BXJ1 281 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 MRPL1Q9BYD6 325 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 KRT23Q9C075 422 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 PRSS22Q9GZN4 317 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 NAPBQ9H115 298 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 SLCO5A1Q9H2Y9 848 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 ZSCAN16Q9H4T2 348 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 HAO2Q9NYQ3 351 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 GDE1Q9NZC3 331 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 RAI14Q9P0K7 980 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 HEY2Q9UBP5 337 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 NCANO14594 1321 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 ZMYM6O95789 1325 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 LAMB2P55268 1798 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 MAGEB17A8MXT2 336 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 SLC7A4O43246 635 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CREG1O75629 220 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 BBOX1O75936 387 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 MTA2O94776 668 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 NDUFB4O95168 129 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 LETM1O95202 739 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 SLPIP03973 132 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 SERPINB2P05120 415 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 NMBRP28336 390 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CTNNA1P35221 906 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 CCR10P46092 362 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 ELLP55199 621 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 EVCP57679 992 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 HAND2P61296 217 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 SIGIRRQ6IA17 410 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 DEF8Q6ZN54 512 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 RBPMS2Q6ZRY4 209 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 SMIM5Q71RC9 77 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 LDB1Q86U70 411 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 OR8H3Q8N146 312 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 BEST3Q8N1M1 668 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 RASGEF1CQ8N431 466 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 GRAPLQ8TC17 118 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 ANP32BQ92688 251 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF653Q96CK0 615 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CHFRQ96EP1 664 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CCDC34Q96HJ3 373 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 SPATA17Q96L03 361 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF830Q96NB3 372 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 LRRC2Q9BYS8 371 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 GPR88Q9GZN0 384 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 RNF41Q9H4P4 317 aaPredicted RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 OLAHQ9NV23 265 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 PSD3Q9NYI0 1048 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 DNAJB4Q9UDY4 337 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 HACL1Q9UJ83 578 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 PADI3Q9ULW8 664 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 CDC14AQ9UNH5 594 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 WBP11Q9Y2W2 641 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 LY75O60449 1722 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF804BA4D1E1 1349 aa4□□□□□ -1.77
SMCO3-201ENST00000316048 PDS5AQ29RF7 1337 aaKnown RBP4□□□□□ -1.77
SMCO3-201ENST00000316048 LRP5O75197 1615 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 C4BP0C0L5 1744 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 ERICH2A1L162 156 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 GOLGA6L4A6NEF3 574 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 BECN2A8MW95 431 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 PRRG2O14669 202 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 CPLX1O14810 134 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 CLGNO14967 610 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 ZC3H11AO75152 810 aaKnown RBP eCLIP3.99□□□□□ -1.77
SMCO3-201ENST00000316048 TBCAO75347 108 aaKnown RBP3.99□□□□□ -1.77
SMCO3-201ENST00000316048 EPN2O95208 641 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 IFNA2P01563 188 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 PTMAP06454 111 aaKnown RBP3.99□□□□□ -1.77
SMCO3-201ENST00000316048 QDPRP09417 244 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 IFNAR1P17181 557 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 GNLYP22749 145 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 CERS1P27544 350 aa3.99□□□□□ -1.77
SMCO3-201ENST00000316048 TDO2P48775 406 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms