RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CAPN1P07384 714 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 FGF4P08620 206 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 CAPN3P20807 821 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 LRP8Q14114 963 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 KBTBD6Q86V97 674 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 NXPE1Q8N323 547 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 GALNT4Q8N4A0 578 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 METTL25Q8N6Q8 603 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 ABTB1Q969K4 478 aaPredicted RBP12.23□□□□□ -0.45
RNF4-201ENST00000314289 SERPINI1Q99574 410 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 PRPF18Q99633 342 aaKnown RBP12.23□□□□□ -0.45
RNF4-201ENST00000314289 GNPTGQ9UJJ9 305 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 NRP2O60462 931 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 LEFTY1O75610 366 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ESRRBO95718 433 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 TFAP2AP05549 437 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ME2P23368 584 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 B4GALNT1Q00973 533 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 STX5Q13190 355 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ARSIQ5FYB1 569 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 SERPINA13PQ6UXR4 307 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 CERS6Q6ZMG9 384 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 TPRG1Q6ZUI0 275 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 PQLC1Q8N2U9 271 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 METTL6Q8TCB7 284 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 COPS7BQ9H9Q2 264 aaPredicted RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 HSPA1AP0DMV8 641 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 HSPA1BP0DMV9 641 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 RPL5P46777 297 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 SLC7A2P52569 658 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 METAP1P53582 386 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 SH3BGRP55822 239 aaPredicted RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 PPIGQ13427 754 aaKnown RBP eCLIP12.22□□□□□ -0.454e-10■■□□□ 12.4
RNF4-201ENST00000314289 BOP1Q14137 746 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 HERC3Q15034 1050 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ARHGAP15Q53QZ3 475 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 IL27RAQ6UWB1 636 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 B3GNT6Q6ZMB0 384 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 Q6ZVL8 140 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 USP45Q70EL2 814 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 GOLGA7Q7Z5G4 137 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 MYO1HQ8N1T3 1032 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ZBTB2Q8N680 514 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 OR4F6Q8NGB9 312 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 MTFMTQ96DP5 389 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 LRGUKQ96M69 825 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 DNAAF2Q9NVR5 837 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 CHCHD3Q9NX63 227 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 PTTG2Q9NZH5 202 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 MAFFQ9ULX9 164 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 PRPF19Q9UMS4 504 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 ATG2BQ96BY7 2078 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 SLC22A2O15244 555 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 C1SP09871 688 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 LBPP18428 481 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ADSLP30566 484 aaPredicted RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 AKT1P31749 480 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ADARP55265 1226 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 UFM1P61960 85 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ARHGEF7Q14155 803 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ADGRD2Q7Z7M1 963 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 C12orf40Q86WS4 652 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 SFTPA1Q8IWL2 248 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 OR56A4Q8NGH8 313 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 PIF1Q9H611 641 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 IPPKQ9H8X2 491 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 FARSBQ9NSD9 589 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 TMPRSS11EQ9UL52 423 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 ITM2BQ9Y287 266 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 MRPS23Q9Y3D9 190 aaKnown RBP12.22□□□□□ -0.45
RNF4-201ENST00000314289 PCDHB1Q9Y5F3 818 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 AP4B1Q9Y6B7 739 aa12.22□□□□□ -0.45
RNF4-201ENST00000314289 TRIOO75962 3097 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 MTCL1Q9Y4B5 1905 aaKnown RBP12.21□□□□□ -0.45
RNF4-201ENST00000314289 PDLIM1O00151 329 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 TAPBPO15533 448 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 KLK8O60259 260 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 POP4O95707 220 aaKnown RBP12.21□□□□□ -0.45
RNF4-201ENST00000314289 CCR7P32248 378 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 ETV3P41162 512 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 MAPK8P45983 427 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 RECQLP46063 649 aaPredicted RBP12.21□□□□□ -0.45
RNF4-201ENST00000314289 TMED1Q13445 227 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 C6orf52Q5T4I8 152 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 GRAMD4Q6IC98 578 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 MIER2Q8N344 545 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 FNDC5Q8NAU1 212 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 FAM110BQ8TC76 370 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 BTBD9Q96Q07 612 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 ASB2Q96Q27 587 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 SLC25A23Q9BV35 468 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 SLAMF8Q9P0V8 285 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 MAP10Q9P2G4 905 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 ZNHIT2Q9UHR6 403 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 IRAK3Q9Y616 596 aa12.21□□□□□ -0.45
RNF4-201ENST00000314289 OR2AG2A6NM03 316 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 OR7A17O14581 309 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 STX16O14662 325 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 CTSLP07711 333 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms