RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
MKS1-201ENST00000313863 LIMD1Q9UGP4 676 aa13.65□□□□□ -0.22
MKS1-201ENST00000313863 ADGRE2Q9UHX3 823 aa13.65□□□□□ -0.22
MKS1-201ENST00000313863 DOLKQ9UPQ8 538 aa13.65□□□□□ -0.22
MKS1-201ENST00000313863 NAALAD2Q9Y3Q0 740 aa13.65□□□□□ -0.22
MKS1-201ENST00000313863 PCDHGA8Q9Y5G5 932 aa13.65□□□□□ -0.22
MKS1-201ENST00000313863 GREB1Q4ZG55 1949 aa13.65□□□□□ -0.22
MKS1-201ENST00000313863 E5RI56 91 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 ENPP3O14638 875 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 BCAS1O75363 584 aaPredicted RBP13.64□□□□□ -0.23
MKS1-201ENST00000313863 OTCP00480 354 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 ALDH2P05091 517 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 PIRTP0C851 137 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 G6PDP11413 515 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 PCNAP12004 261 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 TCF3P15923 654 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 IL7RP16871 459 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 IL1RNP18510 177 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 LPOP22079 712 aaPredicted RBP13.64□□□□□ -0.23
MKS1-201ENST00000313863 RYKP34925 604 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 KPNA1P52294 538 aaPredicted RBP13.64□□□□□ -0.23
MKS1-201ENST00000313863 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
MKS1-201ENST00000313863 HIPK1Q86Z02 1210 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 STK40Q8N2I9 435 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 SLC13A3Q8WWT9 602 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 ZNF566Q969W8 418 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 FAM162AQ96A26 154 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 FKBP10Q96AY3 582 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 MGME1Q9BQP7 344 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 MAGEH1Q9H213 219 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 TRNAU1APQ9NX07 287 aaKnown RBP13.64□□□□□ -0.23
MKS1-201ENST00000313863 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.64□□□□□ -0.23
MKS1-201ENST00000313863 DAPK2Q9UIK4 370 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 PCDHGB1Q9Y5G3 927 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
MKS1-201ENST00000313863 ELOVL7A1L3X0 281 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 FAM92AA1XBS5 289 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 ZNF99A8MXY4 864 aaPredicted RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 LSM1O15116 133 aaKnown RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 RGS14O43566 566 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 NDUFS2O75306 463 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 TSPAN12O95859 305 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 ESR1P03372 595 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 UGT2B4P06133 528 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 CAPN1P07384 714 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 RETP07949 1114 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 ACVRL1P37023 503 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 ERVPABLB-1P60509 514 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 RING1Q06587 406 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 CACNB2Q08289 660 aaPredicted RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 IMPG1Q17R60 797 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 AP5B1Q2VPB7 878 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 ADAMTSL2Q86TH1 951 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 ZCCHC7Q8N3Z6 543 aaKnown RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 ZNF548Q8NEK5 533 aaPredicted RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 BRI3BPQ8WY22 251 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 CSF3RQ99062 836 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 CINPQ9BW66 212 aaPredicted RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 PDFQ9HBH1 243 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 NECTIN3Q9NQS3 549 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 MARCH2Q9P0N8 246 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 POLR3HQ9Y535 204 aaPredicted RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 MICAL3Q7RTP6 2002 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 LOC100130705A0A1B0GUX0 176 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 SLC1A7O00341 560 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 MUSKO15146 869 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 SLC16A6O15403 523 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 UGT2B11O75310 529 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 RECQL5O94762 991 aaPredicted RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 IL6P05231 212 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 OPRL1P41146 370 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 PTGER3P43115 390 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 MAGEA11P43364 429 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 CD47Q08722 323 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 KCNAB2Q13303 367 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 SELPLGQ14242 412 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 OXA1LQ15070 435 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 MEP1AQ16819 746 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 DGUOKQ16854 277 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 PLA2G4EQ3MJ16 856 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 FBXO48Q5FWF7 155 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 MORN1Q5T089 497 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 SIDT2Q8NBJ9 832 aaKnown RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 FBXO30Q8TB52 745 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 CD200R1Q8TD46 325 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 EEF1AKMT1Q8WVE0 214 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 TAMM41Q96BW9 452 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 PDLIM5Q96HC4 596 aaKnown RBP13.63□□□□□ -0.23
MKS1-201ENST00000313863 CEP295NLQ96MC4 621 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 NSMCE3Q96MG7 304 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 SMURF2Q9HAU4 748 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 CPQQ9Y646 472 aa13.63□□□□□ -0.23
MKS1-201ENST00000313863 A0A0U1RQF3 1178 aa13.62□□□□□ -0.23
MKS1-201ENST00000313863 M0R3G1 203 aa13.62□□□□□ -0.23
MKS1-201ENST00000313863 SLC28A1O00337 649 aa13.62□□□□□ -0.23
MKS1-201ENST00000313863 CXCR6O00574 342 aa13.62□□□□□ -0.23
MKS1-201ENST00000313863 ANKRD28O15084 1053 aa13.62□□□□□ -0.23
MKS1-201ENST00000313863 E2F6O75461 281 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms