RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 STK38LQ9Y2H1 464 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 MYO9BQ13459 2157 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 H3BQ06 376 aaPredicted RBP16.42■□□□□ 0.22
CLCF1-201ENST00000312438 GSC2O15499 205 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 TAPBPO15533 448 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 CRCPO75575 148 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 SLCO2B1O94956 709 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 ANXA5P08758 320 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 HIST1H2AGP0C0S8 130 aaPredicted RBP16.42■□□□□ 0.22
CLCF1-201ENST00000312438 HIST1H2ADP20671 130 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 PRLHRP49683 370 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 PKNOX1P55347 436 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 CDC16Q13042 620 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 NAA25Q14CX7 972 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 RBBP7Q16576 425 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 RAET1GQ6H3X3 334 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 TMEM220Q6QAJ8 160 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 EFL1Q7Z2Z2 1120 aaKnown RBP16.42■□□□□ 0.22
CLCF1-201ENST00000312438 LONP2Q86WA8 852 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 AADATQ8N5Z0 425 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 BEND7Q8N7W2 519 aaPredicted RBP16.42■□□□□ 0.22
CLCF1-201ENST00000312438 OR2T3Q8NH03 318 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 SKA2Q8WVK7 121 aaPredicted RBP16.42■□□□□ 0.22
CLCF1-201ENST00000312438 RHBDF1Q96CC6 855 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 C19orf60Q96EN9 201 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 HIST1H2AHQ96KK5 128 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 ZNF382Q96SR6 550 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 HIST1H2AJQ99878 128 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 GABRG3Q99928 467 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 CCM2Q9BSQ5 444 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 H2AFJQ9BTM1 129 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 C8orf33Q9H7E9 229 aaPredicted RBP16.42■□□□□ 0.22
CLCF1-201ENST00000312438 TRIM39Q9HCM9 518 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 ASB1Q9Y576 335 aa16.42■□□□□ 0.22
CLCF1-201ENST00000312438 UROSP10746 265 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 CPA2P48052 419 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 CTSCP53634 463 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 FOXA1P55317 472 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 CDKL1Q00532 357 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 SP140Q13342 867 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 C2orf27AQ580R0 203 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 AGBL4Q5VU57 503 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 ZNF776Q68DI1 518 aaPredicted RBP16.41■□□□□ 0.22
CLCF1-201ENST00000312438 CYB5D1Q6P9G0 228 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 TTC23LQ6PF05 361 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 CHSY3Q70JA7 882 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 UBE2R2Q712K3 238 aaPredicted RBP16.41■□□□□ 0.22
CLCF1-201ENST00000312438 SYVN1Q86TM6 617 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 PELI3Q8N2H9 469 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 HDDC3Q8N4P3 179 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 TWIST2Q8WVJ9 160 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 UTP4Q969X6 686 aaKnown RBP16.41■□□□□ 0.22
CLCF1-201ENST00000312438 NUSAP1Q9BXS6 441 aaKnown RBP16.41■□□□□ 0.22
CLCF1-201ENST00000312438 CD244Q9BZW8 370 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 RASSF4Q9H2L5 321 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 ZNF385DQ9H6B1 395 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 NOL11Q9H8H0 719 aaKnown RBP16.41■□□□□ 0.22
CLCF1-201ENST00000312438 PFDN4Q9NQP4 134 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 G3BP2Q9UN86 482 aaKnown RBP16.41■□□□□ 0.22
CLCF1-201ENST00000312438 PDE10AQ9Y233 779 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 KIAA1549LQ6ZVL6 1849 aa16.41■□□□□ 0.22
CLCF1-201ENST00000312438 A0A1B0GTL3 188 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 GFYI3L273 518 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 K7ESM1 405 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 TM7SF2O76062 418 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 CHEK2O96017 543 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 THRAP10827 490 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 COPAP53621 1224 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 TAS2R38P59533 333 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 RPS14P62263 151 aaKnown RBP16.4■□□□□ 0.22
CLCF1-201ENST00000312438 GTF2H2Q13888 395 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 STARD3Q14849 445 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 C18orf21Q32NC0 220 aaPredicted RBP16.4■□□□□ 0.22
CLCF1-201ENST00000312438 FBXW10Q5XX13 1052 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 TMEM198Q66K66 360 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 GTF2H2CQ6P1K8 395 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 GPRIN3Q6ZVF9 776 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 LARP4Q71RC2 724 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLCF1-201ENST00000312438 GOLGA7Q7Z5G4 137 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 VRK3Q8IV63 474 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 SLC44A3Q8N4M1 653 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 UBTD2Q8WUN7 234 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 TMEM159Q96B96 161 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 ZNF514Q96K75 400 aaPredicted RBP16.4■□□□□ 0.22
CLCF1-201ENST00000312438 CATSPER2Q96P56 530 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 LENG8Q96PV6 779 aaPredicted RBP16.4■□□□□ 0.22
CLCF1-201ENST00000312438 MIPEPQ99797 713 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 CADM1Q9BY67 442 aaKnown RBP16.4■□□□□ 0.22
CLCF1-201ENST00000312438 FBRSQ9HAH7 460 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 KCNK12Q9HB15 430 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 ARL15Q9NXU5 204 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 WWOXQ9NZC7 414 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 ZNF225Q9UK10 706 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 LOC100653049A0A140TA62 436 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 PABPN1LA6NDY0 278 aaKnown RBP16.4■□□□□ 0.22
CLCF1-201ENST00000312438 GRXCR2A6NFK2 248 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 C2CD4DB7Z1M9 353 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 UBDO15205 165 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 MGRN1O60291 552 aa16.4■□□□□ 0.22
CLCF1-201ENST00000312438 KRT34O76011 436 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms