RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TMEM44Q2T9K0 475 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 WSCD2Q2TBF2 565 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF311Q5JNZ3 666 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 FKBP1CQ5VVH2 108 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 QSOX2Q6ZRP7 698 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 LINGO2Q7L985 606 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 PACRGLQ8N7B6 248 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 SRFBP1Q8NEF9 429 aaKnown RBP13.52□□□□□ -0.25
CLCN6-201ENST00000312413 PITPNM1O00562 1244 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 ACOX3O15254 700 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 CILPO75339 1184 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 CHRM5P08912 532 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-201ENST00000312413 JAM2P57087 298 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 MRPS6P82932 125 aaKnown RBP13.52□□□□□ -0.25
CLCN6-201ENST00000312413 DEFA5Q01523 94 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 BNIP3Q12983 259 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 CBLBQ13191 982 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 DRICH1Q6PGQ1 229 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-201ENST00000312413 OR6K2Q8NGY2 324 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 SOCS4Q8WXH5 440 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 SLC9A6Q92581 669 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 EXOSC8Q96B26 276 aaKnown RBP13.52□□□□□ -0.25
CLCN6-201ENST00000312413 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.25
CLCN6-201ENST00000312413 RPL36Q9Y3U8 105 aaKnown RBP13.52□□□□□ -0.25
CLCN6-201ENST00000312413 E9PCH4 1651 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 OR6C70A6NIJ9 312 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 GNA12Q03113 381 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 IQCCQ4KMZ1 466 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 FBXO48Q5FWF7 155 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 FAM46CQ5VWP2 391 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 OR10G6Q8NH81 332 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 C9orf43Q8TAL5 461 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 DQX1Q8TE96 717 aaKnown RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 EBF4Q9BQW3 602 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 OXCT2Q9BYC2 517 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 ANXA2P2A6NMY6 339 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 AKAP8O43823 692 aaKnown RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 ATG13O75143 517 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 PAPSS2O95340 614 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 ANXA2P07355 339 aaKnown RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 TFPIP10646 304 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 PTPN9P43378 593 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 TXNL4AP83876 142 aaKnown RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 UGCGQ16739 394 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 MSANTD1Q6ZTZ1 278 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 BRINP2Q9C0B6 783 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 ATG10Q9H0Y0 220 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 PCDHAC1Q9H158 963 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 IMP3Q9NV31 184 aaKnown RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 TVP23BQ9NYZ1 205 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 PHF24Q9UPV7 400 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 RAI2Q9Y5P3 530 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 PPRC1Q5VV67 1664 aaKnown RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 A0A075B6Q4 140 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 CCRL2O00421 344 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 SMIM10L2AP0DMW4 78 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 SMIM10L2BP0DMW5 78 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 ANXA8P13928 327 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 CKMT2P17540 419 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 FMO3P31513 532 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 FAM174BQ3ZCQ3 159 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 C9orf57Q5W0N0 161 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 MED27Q6P2C8 311 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 CADM2Q8N3J6 435 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 DNAJB8Q8NHS0 232 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 HBEGFQ99075 208 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 LRRC3Q9BY71 257 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 RC3H2Q9HBD1 1191 aaKnown RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 WNT7AO00755 349 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 PDCD5O14737 125 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 SLC2A2P11168 524 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 PEPDP12955 493 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 HTR7P34969 479 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 IGFALSP35858 605 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 SPAM1P38567 509 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 MTPNP58546 118 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 RPL26P61254 145 aaKnown RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 PPP3R1P63098 170 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 BTN3A2P78410 334 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 VSTM1Q6UX27 236 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 OR10H4Q8NGA5 316 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 IL31RAQ8NI17 732 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 EFHD2Q96C19 240 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-201ENST00000312413 ASB9Q96DX5 294 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 COMMD4Q9H0A8 199 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 IFT46Q9NQC8 304 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 CALML5Q9NZT1 146 aa13.51□□□□□ -0.25
CLCN6-201ENST00000312413 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 GATBO75879 557 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 STXBP1P61764 594 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 RPL19P84098 196 aaKnown RBP13.5□□□□□ -0.25
CLCN6-201ENST00000312413 VGLL2Q8N8G2 317 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 OR2L5Q8NG80 312 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 CEP76Q8TAP6 659 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 SLC25A51Q9H1U9 297 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 IKZF4Q9H2S9 585 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 C1orf109Q9NX04 203 aa13.5□□□□□ -0.25
CLCN6-201ENST00000312413 GMIPQ9P107 970 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms