RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 DLL3Q9NYJ7 618 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 TAS2R13Q9NYV9 303 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 GULP1Q9UBP9 304 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 BTBD3Q9Y2F9 522 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 PLEKHM1Q9Y4G2 1056 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 PCDHGA1Q9Y5H4 931 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 LRP4O75096 1905 aa17.55■□□□□ 0.4
SSSCA1-201ENST00000309328 NOBOXO60393 691 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 SNX2O60749 519 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 ACSL3O95573 720 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 XRCC1P18887 633 aaPredicted RBP17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 ACP1P24666 158 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 AOAHP28039 575 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 BOP1Q14137 746 aaKnown RBP17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 PUM1Q14671 1186 aaKnown RBP eCLIP17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 TRIP6Q15654 476 aaKnown RBP17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 SMAD1Q15797 465 aaKnown RBP17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 KBTBD12Q3ZCT8 623 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 GRTP1Q5TC63 336 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 FAM45BPQ6NSW5 357 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 TRIM48Q8IWZ4 208 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 SLC35F3Q8IY50 421 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 NAGSQ8N159 534 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 WDR48Q8TAF3 677 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 FAM45AQ8TCE6 357 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 VPS39Q96JC1 886 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 CCDC77Q9BR77 488 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 UCK1Q9HA47 277 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 PPCSQ9HAB8 311 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 PRDM8Q9NQV8 689 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 PADI4Q9UM07 663 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 IKBKGQ9Y6K9 419 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 COLEC10Q9Y6Z7 277 aa17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 COL5A1P20908 1838 aaPredicted RBP17.54■□□□□ 0.4
SSSCA1-201ENST00000309328 CFAP54Q96N23 3096 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 ADAMTS9Q9P2N4 1935 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 PLXNB3Q9ULL4 1909 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 SLC5A10A0PJK1 596 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 EME2A4GXA9 379 aaPredicted RBP17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 KDM1AO60341 852 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 GPC4O75487 556 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 SLCO2B1O94956 709 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 RPN2P04844 631 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 CBSLP0DN79 551 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 ENO3P13929 434 aaPredicted RBP17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 SPRP35270 261 aaPredicted RBP17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 CBSP35520 551 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 GPR3P46089 330 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 VSNL1P62760 191 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 TCEA2Q15560 299 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 CNSTQ6PJW8 725 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 TAOK1Q7L7X3 1001 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 PDZD3Q86UT5 571 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 ZC3HC1Q86WB0 502 aaKnown RBP17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 SLC22A15Q8IZD6 547 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 ZBTB2Q8N680 514 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 KYQ8NBH2 561 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 CXorf40BQ96DE9 158 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 TSPAN17Q96FV3 270 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 TXLNGYQ9BZA5 131 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 EPB41L1Q9H4G0 881 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 SIRPGQ9P1W8 387 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 FETUBQ9UGM5 382 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 RABGEF1Q9UJ41 708 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 RAB21Q9UL25 225 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 VWA7Q9Y334 891 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 DMXL1Q9Y485 3027 aa17.53■□□□□ 0.4
SSSCA1-201ENST00000309328 TMEM131Q92545 1883 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 TP53BP1Q12888 1972 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 RHPN2P1A8MT19 583 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 RIPK2O43353 540 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 VIPP01282 170 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 C1QAP02745 245 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 RPL10P27635 214 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 GABRB3P28472 473 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 CCR7P32248 378 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 E2F1Q01094 437 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 POU4F1Q01851 419 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 HHEXQ03014 270 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 HSPA14Q0VDF9 509 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 CLPPQ16740 277 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 ZNF789Q5FWF6 425 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 CAPRIN2Q6IMN6 1127 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 FAM83HQ6ZRV2 1179 aaPredicted RBP17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 MICALCLQ6ZW33 695 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 NEK10Q6ZWH5 1172 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 ZNF438Q7Z4V0 828 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 CCDC91Q7Z6B0 441 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 ARL14Q8N4G2 192 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 PPM1NQ8N819 430 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 DEFB124Q8NES8 71 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 SLC37A2Q8TED4 501 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 INPP5DQ92835 1189 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 FOPNLQ96NB1 174 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 RBBP8Q99708 897 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 PARD6BQ9BYG5 372 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 OR52A5Q9H2C5 316 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 MVB12BQ9H7P6 319 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 POPDC3Q9HBV1 291 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms