RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CCDC38Q502W7 563 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 ZNF843Q8N446 348 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 CLDN19Q8N6F1 224 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 HM13Q8TCT9 377 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 SLC12A9Q9BXP2 914 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 OR52A5Q9H2C5 316 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 IMP3Q9NV31 184 aaKnown RBP19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 CCDC78A2IDD5 438 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 IFNB1P01574 187 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 ZNF28P17035 718 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 RPL22P35268 128 aaKnown RBP19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 FDFT1P37268 417 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 PPM1FP49593 454 aaPredicted RBP19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 CACNG1Q06432 222 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 CDH17Q12864 832 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 SEPT6Q14141 434 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 LY6DQ14210 128 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 CCNG2Q16589 344 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 KCTD19Q17RG1 926 aaPredicted RBP19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 CEACAM20Q6UY09 585 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 LINC00523Q86TU6 105 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 HEXDCQ8WVB3 486 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 SLC41A2Q96JW4 573 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 C12orf66Q96MD2 445 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 RANBP9Q96S59 729 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 NRTNQ99748 197 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 KIR3DX1Q9H7L2 352 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 COG4Q9H9E3 785 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 FAM8A1Q9UBU6 413 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 SLC2A6Q9UGQ3 507 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 SLC24A2Q9UI40 661 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 RIMKLBQ9ULI2 386 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 ZNF148Q9UQR1 794 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 PCDHB11Q9Y5F2 797 aa19.35■□□□□ 0.69
PDZRN3-202ENST00000308537 IGHV5-51A0A0C4DH38 117 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 CCDC162PA2VCL2 907 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 OR5K3A6NET4 321 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 LIFP15018 202 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 NELFEP18615 380 aaKnown RBP19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 PDHA2P29803 388 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 SEPHS1P49903 392 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 CYP4F2P78329 520 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 ZRANB3Q5FWF4 1079 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 FAM92BQ6ZTR7 304 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 ZNF534Q76KX8 674 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 CFAP206Q8IYR0 622 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 CACNA2D3Q8IZS8 1091 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 EXD3Q8N9H8 876 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 ZFPM2Q8WW38 1151 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 LRRC45Q96CN5 670 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 DCUN1D1Q96GG9 259 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 ZPBPQ9BS86 351 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 RAB6BQ9NRW1 208 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 PPP2R2CQ9Y2T4 447 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 SEC16AO15027 2179 aa19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 SNRNP200O75643 2136 aaKnown RBP19.34■□□□□ 0.69
PDZRN3-202ENST00000308537 GOLGA6L3A6NEY3 463 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 POLR1CO15160 346 aaPredicted RBP19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 STK17BO94768 372 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 POLBP06746 335 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 RALBP11234 206 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 MSNP26038 577 aaKnown RBP19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 CACHD1Q5VU97 1274 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 IRGCQ6NXR0 463 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 CERS6Q6ZMG9 384 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 TRIM58Q8NG06 486 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 MAP3K3Q99759 626 aa19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 DRG1Q9Y295 367 aaKnown RBP19.33■□□□□ 0.68
PDZRN3-202ENST00000308537 LOC101059948A0A1B0GTJ6 334 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 CFAP99D6REC4 459 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 TERTO14746 1132 aaKnown RBP19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 FGGP02679 453 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 FGF5P12034 268 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 ATP1A2P50993 1020 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 SEMA3AQ14563 771 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 ITIH4Q14624 930 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 TAF1BQ53T94 588 aaPredicted RBP19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 TSTD2Q5T7W7 516 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 PACS1Q6VY07 963 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 NLGN4XQ8N0W4 816 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 NLGN4YQ8NFZ3 816 aaPredicted RBP19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 ZDHHC12Q96GR4 267 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 PPM1MQ96MI6 270 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 ALS2CR12Q96Q35 445 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 CCM2Q9BSQ5 444 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 PAK5Q9P286 719 aa19.32■□□□□ 0.68
PDZRN3-202ENST00000308537 HEATR9A2RTY3 570 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 TIAF1O95411 115 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 ITGB2P05107 769 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 SLC35G4P0C7Q5 338 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 KCNJ1P48048 391 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 MAP7Q14244 749 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 SKIDA1Q1XH10 827 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 TAS2R42Q7RTR8 314 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 PRELID2Q8N945 189 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 EXTL1Q92935 676 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 HDAC10Q969S8 669 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 RNF31Q96EP0 1072 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 SGSM3Q96HU1 749 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 OR6C1Q96RD1 312 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms