RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 USP51Q70EK9 711 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 HEATR4Q86WZ0 1026 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 PGBD5Q8N414 524 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 DHRSXQ8N5I4 330 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 PAPD5Q8NDF8 572 aaKnown RBP10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 OR9I1Q8NGQ6 314 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 FAM110BQ8TC76 370 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 RASSF5Q8WWW0 418 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 TCEAL4Q96EI5 215 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 TRMT2BQ96GJ1 504 aaKnown RBP10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 SLC39A3Q9BRY0 314 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 PRKD2Q9BZL6 878 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 MUC3BQ9H195 1237 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 POLR1BQ9H9Y6 1135 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 AURKCQ9UQB9 309 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 MYOFQ9NZM1 2061 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 LINC01553A4QN01 128 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 GRM6O15303 877 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 CPNE6O95741 557 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 HLCSP50747 726 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 CLCN5P51795 746 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 GEMP55040 296 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 TMBIM6P55061 237 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 CTAG1AP78358 180 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 SERINC3Q13530 473 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 CAMK1Q14012 370 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 ANKRD26P1Q6NSI1 321 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 NEK10Q6ZWH5 1172 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 GALNT7Q86SF2 657 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 SPPL2CQ8IUH8 684 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 GRAMD2AQ8IUY3 354 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 CACTIN-AS1Q8N1I8 211 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 ST13P5Q8NFI4 369 aaPredicted RBP10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 SUN5Q8TC36 379 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 SPPL3Q8TCT6 385 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 ADAMTS19Q8TE59 1207 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 OVCA2Q8WZ82 227 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 C19orf60Q96EN9 201 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 CDK5RAP1Q96SZ6 601 aaKnown RBP10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 ARMC7Q9H6L4 198 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 CYP4F12Q9HCS2 524 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 RIC8BQ9NVN3 520 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 PKD2L2Q9NZM6 624 aa10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 GMPR2Q9P2T1 348 aaKnown RBP10.19□□□□□ -0.78
APOBEC3F-201ENST00000308521 A0A0J9YYE9 177 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 A0A1W2PPW3 197 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 UBFD1O14562 309 aaKnown RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 NOL3O60936 208 aaKnown RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 MATN4O95460 622 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 S100BP04271 92 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 ADH1AP07327 375 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 FGF4P08620 206 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 ALDOCP09972 364 aaKnown RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 UMPSP11172 480 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 GFAPP14136 432 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 SLC26A3P40879 764 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 NFKB2Q00653 900 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 ATP1A4Q13733 1029 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 UGT3A2Q3SY77 523 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 PITRM1Q5JRX3 1037 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CCNYL2Q5T2Q4 361 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 ADGRF1Q5T601 910 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 ZNF470Q6ECI4 717 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 TIGD7Q6NT04 549 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 PSRC1Q6PGN9 363 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 LINGO4Q6UY18 593 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 PRR23CQ6ZRP0 262 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 TPGS1Q6ZTW0 290 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 TMEM26Q6ZUK4 368 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 KCTD8Q6ZWB6 473 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CLYBLQ8N0X4 340 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CARNMT1Q8N4J0 409 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 MRPL43Q8N983 215 aaKnown RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 LEMD2Q8NC56 503 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 GABPB2Q8TAK5 448 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CYGBQ8WWM9 190 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 MRGPRX2Q96LB1 330 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 UBXN10Q96LJ8 280 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 ASB2Q96Q27 587 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 FSD1LQ9BXM9 530 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CMTM6Q9NX76 183 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 SMPD3Q9NY59 655 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 ZNF639Q9UID6 485 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CROCCQ5TZA2 2017 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 H0YAE9 185 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 H3BNC9 293 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CBX4O00257 560 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CA3P07451 260 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 EPCAMP16422 314 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 S100A5P33763 92 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 LEPRP48357 1165 aaKnown RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 RENBPP51606 427 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 NTHL1P78549 312 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 ADARB1P78563 741 aaKnown RBP10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 GNA12Q03113 381 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 HSPA14Q0VDF9 509 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 TUBA3CQ13748 450 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 CYBRD1Q53TN4 286 aa10.18□□□□□ -0.78
APOBEC3F-201ENST00000308521 FGD3Q5JSP0 725 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms