RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ZNF658BQ4V348 819 aaPredicted RBP6.84□□□□□ -1.31
PTCD2-201ENST00000308077 FBXO48Q5FWF7 155 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF678Q5SXM1 525 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 FAM219BQ5XKK7 198 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 TMEM220Q6QAJ8 160 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 SBSNQ6UWP8 590 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 C6orf89Q6UWU4 347 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 XKR5Q6UX68 686 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 KIAA1324Q6UXG2 1013 aaKnown RBP6.84□□□□□ -1.31
PTCD2-201ENST00000308077 ADAMTSL4Q6UY14 1074 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 TRIM67Q6ZTA4 783 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 USP30Q70CQ3 517 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 FAM124AQ86V42 546 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 SLC22A9Q8IVM8 553 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 LILRA3Q8N6C8 439 aaPredicted RBP6.84□□□□□ -1.31
PTCD2-201ENST00000308077 CCNYL1Q8N7R7 359 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF781Q8N8C0 355 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 PTGR2Q8N8N7 351 aaPredicted RBP6.84□□□□□ -1.31
PTCD2-201ENST00000308077 FLCNQ8NFG4 579 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 DLG3Q92796 817 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 COX14Q96I36 57 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 RMDN2Q96LZ7 410 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 LGR4Q9BXB1 951 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 C1QTNF2Q9BXJ5 285 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 DRC3Q9H069 523 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 OR2AG1Q9H205 316 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 PNPOQ9NVS9 261 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 KLHL42Q9P2K6 505 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 ATXN10Q9UBB4 475 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 DCTN4Q9UJW0 460 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 FZD4Q9ULV1 537 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 SCML1Q9UN30 329 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 SORCS3Q9UPU3 1222 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 CDYLQ9Y232 598 aa6.84□□□□□ -1.31
PTCD2-201ENST00000308077 NCF1BA6NI72 391 aaPredicted RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 NCF1CA8MVU1 366 aaPredicted RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 RAD51BO15315 384 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 KLK8O60259 260 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 NPHS1O60500 1241 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 SMIM24O75264 130 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 CDK14O94921 469 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 SIX3O95343 332 aaPredicted RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 HSPA4LO95757 839 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 PAK4O96013 591 aaPredicted RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 TPBGLP0DKB5 382 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 CBSLP0DN79 551 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 TROVE2P10155 538 aaKnown RBP eCLIP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 NCF1P14598 390 aaPredicted RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 IMPDH1P20839 514 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 MPSTP25325 297 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 CBSP35520 551 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 RGS4P49798 205 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 TPMTP51580 245 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 RPS21P63220 83 aaKnown RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 CDK3Q00526 305 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 PRKCQQ04759 706 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 CCDC15Q0P6D6 951 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 BOP1Q14137 746 aaKnown RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 PHKG1Q16816 387 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 PFKFB4Q16877 469 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 UNC50Q53HI1 259 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 ARL13AQ5H913 290 aaPredicted RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 KIAA1161Q6NSJ0 714 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 MAVSQ7Z434 540 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 KBTBD6Q86V97 674 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 HEATR4Q86WZ0 1026 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 CRLF3Q8IUI8 442 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 MYO1HQ8N1T3 1032 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 HMGB4Q8WW32 186 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 SREK1Q8WXA9 508 aaKnown RBP6.84□□□□□ -1.32
PTCD2-201ENST00000308077 ELMO1Q92556 727 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 CCDC126Q96EE4 140 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 L3HYPDHQ96EM0 354 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 HIC2Q96JB3 615 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 TRIM55Q9BYV6 548 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 SHCBP1LQ9BZQ2 653 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 FOXQ1Q9C009 403 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 GSTO2Q9H4Y5 243 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 LMAN1LQ9HAT1 526 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 PREBQ9HCU5 417 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 TNFRSF12AQ9NP84 129 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 LTB4R2Q9NPC1 389 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 GULP1Q9UBP9 304 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 EBF1Q9UH73 591 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 ARL2BPQ9Y2Y0 163 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 TMEM98Q9Y2Y6 226 aa6.84□□□□□ -1.32
PTCD2-201ENST00000308077 TECTAO75443 2155 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 TBC1D3DA0A087WVF3 549 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 TBC1D3IA0A087WXS9 549 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 TBC1D3EA0A087X179 549 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 TBC1D3KA0A087X1G2 549 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 A0A0G2JND7 137 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 CCDC189A1A4V9 331 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 TBC1D3FA6NER0 549 aaPredicted RBP6.83□□□□□ -1.32
PTCD2-201ENST00000308077 C19orf67A6NJJ6 358 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 SYCE1LA8MT33 242 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 CHURC1-FNTBB4DL54 471 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 TBC1D3LB9A6J9 549 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 QSOX1O00391 747 aa6.83□□□□□ -1.32
PTCD2-201ENST00000308077 ZNF195O14628 629 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms