RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 GSTO2Q9H4Y5 243 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 TXNRD2Q9NNW7 524 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 SMPD4Q9NXE4 827 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 SAMD4AQ9UPU9 718 aaKnown RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 SLC27A5Q9Y2P5 690 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 MMP3P08254 477 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 GSTT2P0CG29 244 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 GSTT2BP0CG30 244 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 MATN1P21941 496 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 GPX3P22352 226 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 DGKAP23743 735 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 SOX4Q06945 474 aaPredicted RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 CDH18Q13634 790 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 TAB1Q15750 504 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 TYW3Q6IPR3 259 aaKnown RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 STK40Q8N2I9 435 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 ARRDC4Q8NCT1 418 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 TRIM63Q969Q1 353 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 CDKN2AIPNLQ96HQ2 116 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 TM6SF2Q9BZW4 377 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 OSBPL2Q9H1P3 480 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 EHD1Q9H4M9 534 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 ZIM2Q9NZV7 527 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 TMX2-CTNND1H3BSU7 103 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 PDHXO00330 501 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 NBNO60934 754 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 C7P10643 843 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 RRM2P31350 389 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 LEPRP48357 1165 aaKnown RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 PPM1FP49593 454 aaPredicted RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 PHACTR4Q8IZ21 702 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 HS3ST5Q8IZT8 346 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 C19orf18Q8NEA5 215 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 OR52J3Q8NH60 311 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 ACDQ96AP0 544 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 RPRD1BQ9NQG5 326 aaKnown RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 FKBPLQ9UIM3 349 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 DFNA5O60443 496 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 TNFRSF21O75509 655 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 C1QAP02745 245 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 FUCA1P04066 466 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 GRK3P35626 688 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 CHI3L1P36222 383 aaPredicted RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 GTF2H2Q13888 395 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 SYTL3Q4VX76 610 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 NOL9Q5SY16 702 aaKnown RBP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 GTF2H2CQ6P1K8 395 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 LARP4Q71RC2 724 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEC23A-201ENST00000307712 MON1AQ86VX9 555 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 CITED4Q96RK1 184 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 SLC30A3Q99726 388 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 RBPJLQ9UBG7 517 aa13.28□□□□□ -0.28
SEC23A-201ENST00000307712 ARVCFO00192 962 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 PIRO00625 290 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 PRMT5O14744 637 aaPredicted RBP13.27□□□□□ -0.28
SEC23A-201ENST00000307712 ANXA5P08758 320 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 VARSP26640 1264 aaKnown RBP13.27□□□□□ -0.28
SEC23A-201ENST00000307712 CRATP43155 626 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 CRYBB1P53674 252 aaPredicted RBP13.27□□□□□ -0.28
SEC23A-201ENST00000307712 C1DQ13901 141 aaKnown RBP13.27□□□□□ -0.28
SEC23A-201ENST00000307712 FAM151BQ6UXP7 276 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 MINDY2Q8NBR6 621 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 OR7D4Q8NG98 312 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 SLC2A13Q96QE2 648 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 SMAD5Q99717 465 aaKnown RBP13.27□□□□□ -0.28
SEC23A-201ENST00000307712 ERVK-18Q9QC07 812 aa13.27□□□□□ -0.28
SEC23A-201ENST00000307712 SMIM35A0A1B0GVV1 85 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 TMCC2O75069 709 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 ALDOCP09972 364 aaKnown RBP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 CD47Q08722 323 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 PCBP1Q15365 356 aaKnown RBP eCLIP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 DUSP28Q4G0W2 176 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 TIGD5Q53EQ6 642 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 KRT73Q86Y46 540 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 PHF21AQ96BD5 680 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 AARSD1Q9BTE6 412 aaKnown RBP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 FAM118AQ9NWS6 357 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 CRNNQ9UBG3 495 aaPredicted RBP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 KLHL20Q9Y2M5 609 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 S1PR4O95977 384 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 CD1DP15813 335 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 HPCAL1P37235 193 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 APLP1P51693 650 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 ZNF280AP59817 542 aaPredicted RBP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 ELP6Q0PNE2 266 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 PKDCCQ504Y2 493 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 SPANXN4Q5MJ08 99 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 C14orf80Q86SX3 495 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 ST13P5Q8NFI4 369 aaPredicted RBP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 VPS35Q96QK1 796 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 ADAM2Q99965 735 aa13.27□□□□□ -0.29
SEC23A-201ENST00000307712 AGO1Q9UL18 857 aaKnown RBP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.27□□□□□ -0.29
SEC23A-201ENST00000307712 TBX18O95935 607 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms