RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MARCH2Q9P0N8 246 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 PRKAB1Q9Y478 270 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 C16orf96A6NNT2 1141 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 VPS26AO75436 327 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 RPL17P18621 184 aaKnown RBP14.38□□□□□ -0.11
PTPN9-201ENST00000306726 GPX3P22352 226 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 MC4RP32245 332 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 BCAP31P51572 246 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 GPR153Q6NV75 609 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 NCCRP1Q6ZVX7 275 aaPredicted RBP14.38□□□□□ -0.11
PTPN9-201ENST00000306726 THAP5Q7Z6K1 395 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 IGFN1Q86VF2 1251 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 OSCP1Q8WVF1 389 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 COMMD8Q9NX08 183 aa14.38□□□□□ -0.11
PTPN9-201ENST00000306726 RCOR3Q9P2K3 495 aaPredicted RBP14.38□□□□□ -0.11
PTPN9-201ENST00000306726 LEF1Q9UJU2 399 aaPredicted RBP14.38□□□□□ -0.11
PTPN9-201ENST00000306726 PSMD3O43242 534 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 S1PR4O95977 384 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 HSPA14Q0VDF9 509 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 CCDC92Q53HC0 331 aaPredicted RBP14.37□□□□□ -0.11
PTPN9-201ENST00000306726 SPANXN4Q5MJ08 99 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 KCTD11Q693B1 232 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 Q6ZPB1 254 aaPredicted RBP14.37□□□□□ -0.11
PTPN9-201ENST00000306726 HORMAD1Q86X24 394 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 P3H2Q8IVL5 708 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 ZFP90Q8TF47 636 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 IGSF8Q969P0 613 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 CEP19Q96LK0 163 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 OR52E6Q96RD3 313 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 FUNDC2Q9BWH2 189 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 NSUN3Q9H649 340 aaKnown RBP14.37□□□□□ -0.11
PTPN9-201ENST00000306726 GKN1Q9NS71 199 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 RIC8BQ9NVN3 520 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 PCDHGA8Q9Y5G5 932 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 ALPIP09923 528 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 TNK2Q07912 1038 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 ZCCHC8Q6NZY4 707 aaKnown RBP14.37□□□□□ -0.11
PTPN9-201ENST00000306726 ELMSAN1Q6PJG2 1045 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 DCDC5Q6ZRR9 648 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 DENND1CQ8IV53 801 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 DTWD1Q8N5C7 304 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 FCRL5Q96RD9 977 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 PARVBQ9HBI1 364 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 PDE10AQ9Y233 779 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 OPN1SWP03999 348 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 NR4A2P43354 598 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 ARSFP54793 590 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 CCNYL2Q5T2Q4 361 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 LARP4Q71RC2 724 aaKnown RBP eCLIP14.37□□□□□ -0.11
PTPN9-201ENST00000306726 SLC22A16Q86VW1 577 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 ARHGAP12Q8IWW6 846 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 NDNFQ8TB73 568 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 TBC1D15Q8TC07 691 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 SPPL2AQ8TCT8 520 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 ANKRD60Q9BZ19 345 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 TMEM181Q9P2C4 612 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 ERVK-18Q9QC07 812 aa14.37□□□□□ -0.11
PTPN9-201ENST00000306726 CAB39Q9Y376 341 aaPredicted RBP14.37□□□□□ -0.11
PTPN9-201ENST00000306726 SNAP91O60641 907 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 DNTTP04053 509 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 IDO1P14902 403 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 CCNCP24863 283 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 PIGAP37287 484 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 PLA2G16P53816 162 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 PFKPQ01813 784 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 LCP2Q13094 533 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 ATXN7L2Q5T6C5 722 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 MFSD4BQ5TF39 518 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 FBXL22Q6P050 247 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 OR13J1Q8NGT2 312 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 SLC47A1Q96FL8 570 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 NODALQ96S42 347 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 IPPKQ9H8X2 491 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 ATP13A1Q9HD20 1204 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 ZNF510Q9Y2H8 683 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 DERAQ9Y315 318 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 IRAK2O43187 625 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 EFCAB14O75071 495 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 MYO1DO94832 1006 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 ANGPTL1O95841 491 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 GLUD1P00367 558 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 SERPINA1P01009 418 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 ANXA6P08133 673 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 CKBP12277 381 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 IL2P60568 153 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 RPS3AP61247 264 aaKnown RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 TXNL4AP83876 142 aaKnown RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 TAF10Q12962 218 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 BOP1Q14137 746 aaKnown RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 SPOUT1Q5T280 376 aaKnown RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 DCP1BQ8IZD4 617 aaKnown RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 HTATIP2Q9BUP3 242 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 BEX2Q9BXY8 128 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 PRKD2Q9BZL6 878 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 TRMT13Q9NUP7 481 aaKnown RBP14.36□□□□□ -0.11
PTPN9-201ENST00000306726 IKZF3Q9UKT9 509 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 MTX2O75431 263 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 TNFRSF1BP20333 461 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 TAB1Q15750 504 aa14.36□□□□□ -0.11
PTPN9-201ENST00000306726 UGT3A2Q3SY77 523 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms