RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PIAS2O75928 621 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 ENGP17813 658 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 VCLP18206 1134 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 ACTR1BP42025 376 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 RAB10P61026 200 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 ACTR1AP61163 376 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 TMEM207Q6UWW9 146 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 VRK3Q8IV63 474 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 TSPAN17Q96FV3 270 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 RUFY1Q96T51 708 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 ZDHHC5Q9C0B5 715 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 VIPAS39Q9H9C1 493 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 UCKL1Q9NWZ5 548 aa26.62■■□□□ 1.85
HDAC3-201ENST00000305264 ARHGEF17Q96PE2 2063 aaPredicted RBP26.61■■□□□ 1.85
HDAC3-201ENST00000305264 SLC5A10A0PJK1 596 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 AGPSO00116 658 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 MAP2K7O14733 419 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 SYPP08247 313 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 RXRGP48443 463 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 ARRB1P49407 418 aaPredicted RBP26.61■■□□□ 1.85
HDAC3-201ENST00000305264 CSRP3P50461 194 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 UGT3A1Q6NUS8 523 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 IL27RAQ6UWB1 636 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 CPNE9Q8IYJ1 553 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 LMX1AQ8TE12 382 aa26.61■■□□□ 1.85
HDAC3-201ENST00000305264 GTPBP2Q9BX10 602 aaKnown RBP26.61■■□□□ 1.85
HDAC3-201ENST00000305264 TSR3Q9UJK0 312 aaKnown RBP26.61■■□□□ 1.85
HDAC3-201ENST00000305264 A0A1B0GTQ1 180 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 LNP1A1A4G5 178 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 LIN7AO14910 233 aaPredicted RBP26.6■■□□□ 1.85
HDAC3-201ENST00000305264 GPC4O75487 556 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 WISP3O95389 354 aaPredicted RBP26.6■■□□□ 1.85
HDAC3-201ENST00000305264 APOA4P06727 396 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 PDHA2P29803 388 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 SKIV2L2P42285 1042 aaKnown RBP26.6■■□□□ 1.85
HDAC3-201ENST00000305264 MAGEA12P43365 314 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 SPEM2Q0P670 501 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 SF3A2Q15428 464 aaKnown RBP26.6■■□□□ 1.85
HDAC3-201ENST00000305264 SEPT7Q16181 437 aaKnown RBP26.6■■□□□ 1.85
HDAC3-201ENST00000305264 ACSBG2Q5FVE4 666 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 ASZ1Q8WWH4 475 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 INPP5DQ92835 1189 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 GSDMCQ9BYG8 508 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 GPAMQ9HCL2 828 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 NCDNQ9UBB6 729 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 SPASTQ9UBP0 616 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 KLHL33A6NCF5 533 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 KPNA5O15131 536 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 SLC35E2BP0CK96 405 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 ZNF37AP17032 561 aaPredicted RBP26.6■■□□□ 1.85
HDAC3-201ENST00000305264 KRT15P19012 456 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 RPL10P27635 214 aaKnown RBP26.6■■□□□ 1.85
HDAC3-201ENST00000305264 TYK2P29597 1187 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 BNIP3Q12983 259 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 GBX1Q14549 363 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 METRNLQ641Q3 311 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 RAPH1Q70E73 1250 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 TMEM159Q96B96 161 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 POPDC3Q9HBV1 291 aa26.6■■□□□ 1.85
HDAC3-201ENST00000305264 A0A1W2PPM1 405 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 AQP9O43315 295 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 KCNJ13O60928 360 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 RFPL1O75677 317 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 ZNF806P0C7X5 589 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 EPHA8P29322 1005 aaPredicted RBP26.59■■□□□ 1.85
HDAC3-201ENST00000305264 ELOCQ15369 112 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 PPM1JQ5JR12 505 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 PLEKHS1Q5SXH7 462 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 TIFABQ6ZNK6 161 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 TAF8Q7Z7C8 310 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 PHOX2BQ99453 314 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 CENPHQ9H3R5 247 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 KLHL42Q9P2K6 505 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 TBC1D29Q9UFV1 150 aa26.59■■□□□ 1.85
HDAC3-201ENST00000305264 CER1O95813 267 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 DGKAP23743 735 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 FSTL5Q8N475 847 aaPredicted RBP26.58■■□□□ 1.85
HDAC3-201ENST00000305264 ANKRD49Q8WVL7 239 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 GLMNQ92990 594 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 PRDM8Q9NQV8 689 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 PSMD13Q9UNM6 376 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 SNX2O60749 519 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 SLCO2B1O94956 709 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 EML2O95834 649 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 C2P06681 752 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 CRABP2P29373 138 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 CLCNKAP51800 687 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 DNAJC3Q13217 504 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 TTLL9Q3SXZ7 439 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 SPDYE1Q8NFV5 336 aaPredicted RBP26.58■■□□□ 1.85
HDAC3-201ENST00000305264 EEF1AKMT1Q8WVE0 214 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 OR52A5Q9H2C5 316 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 TAAR2Q9P1P5 351 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 RAPGEFL1Q9UHV5 662 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 WDR37Q9Y2I8 494 aa26.58■■□□□ 1.85
HDAC3-201ENST00000305264 EP300Q09472 2414 aaPredicted RBP26.57■■□□□ 1.84
HDAC3-201ENST00000305264 RGS16O15492 202 aaPredicted RBP26.57■■□□□ 1.84
HDAC3-201ENST00000305264 TSPAN12O95859 305 aa26.57■■□□□ 1.84
HDAC3-201ENST00000305264 IRF9Q00978 393 aa26.57■■□□□ 1.84
HDAC3-201ENST00000305264 SLC22A15Q8IZD6 547 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms