RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 KLF1Q13351 362 aaPredicted RBP12.68□□□□□ -0.38
COL3A1-201ENST00000304636 RAET1GQ6H3X3 334 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ZNF773Q6PK81 442 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 CFAP52Q8N1V2 620 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 MARVELD2Q8N4S9 558 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 TP53INP1Q96A56 240 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 NTAN1Q96AB6 310 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 FBXL8Q96CD0 374 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 SNX27Q96L92 541 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ANKRA2Q9H9E1 313 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 C3orf14Q9HBI5 128 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ZIM2Q9NZV7 527 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 DPY19L1Q2PZI1 675 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 AKIRIN2Q53H80 203 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 RNF44Q7L0R7 432 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ANKRD46Q86W74 232 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 CENPSQ8N2Z9 138 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 CRELD1Q96HD1 420 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 FCRL4Q96PJ5 515 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 S100A13Q99584 98 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 GSDMCQ9BYG8 508 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 DCSTAMPQ9H295 470 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 OAS3Q9Y6K5 1087 aaKnown RBP12.68□□□□□ -0.38
COL3A1-201ENST00000304636 SCAMP3O14828 347 aaKnown RBP12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ANXA8P13928 327 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 HOXD13P35453 343 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 SPAM1P38567 509 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ZNF730Q6ZMV8 503 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ASRGL1Q7L266 308 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 TREML1Q86YW5 311 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 SIDT2Q8NBJ9 832 aaKnown RBP12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ZNF384Q8TF68 577 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 RFKQ969G6 155 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 HMCESQ96FZ2 354 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 KCNN2Q9H2S1 579 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 SLIT2O94813 1529 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 WWP2O00308 870 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 HTRA2O43464 458 aaPredicted RBP12.68□□□□□ -0.38
COL3A1-201ENST00000304636 HNMTP50135 292 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 IL10RBQ08334 325 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 TUSC3Q13454 348 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 GPC2Q8N158 579 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 CXorf40AQ8TE69 158 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ISOC1Q96CN7 298 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ERLEC1Q96DZ1 483 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 HBEGFQ99075 208 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 ITPAQ9BY32 194 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 LIN28AQ9H9Z2 209 aaKnown RBP12.68□□□□□ -0.38
COL3A1-201ENST00000304636 DUOX1Q9NRD9 1551 aa12.68□□□□□ -0.38
COL3A1-201ENST00000304636 TRAV19A0A0A6YYK7 116 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 A0A1W2PRG6 482 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ZW10O43264 779 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 KERAO60938 352 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 SNX4O95219 450 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ALDH3A2P51648 485 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ZNF697Q5TEC3 545 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 GJD3Q8N144 294 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 GTPBP3Q969Y2 492 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 PPP1R14AQ96A00 147 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ZUFSPQ96AP4 578 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 GPR22Q99680 433 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 BAIAP2Q9UQB8 552 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 MAP4K5Q9Y4K4 846 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 A0A1W2PQ72 361 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ADM5C9JUS6 153 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 IRF6O14896 467 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ABCB7O75027 752 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 DNAJA1P31689 397 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 AP3S2P59780 193 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 OGDHQ02218 1023 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 C2orf80Q0P641 193 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 IKBKEQ14164 716 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 FBXO43Q4G163 708 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 SH3D19Q5HYK7 790 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ZC3HC1Q86WB0 502 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 RAVER1Q8IY67 606 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 SLC7A6OSQ96CW6 309 aaPredicted RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 AURKBQ96GD4 344 aaPredicted RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 SNTG1Q9NSN8 517 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ZNF780BQ9Y6R6 833 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 NDUFV1P49821 464 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 GSK3BP49841 420 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 SLC10A6Q3KNW5 377 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 CXorf57Q6NSI4 855 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 TUBA3EQ6PEY2 450 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 SLC22A16Q86VW1 577 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 CPNE9Q8IYJ1 553 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 GFM1Q96RP9 751 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 C1QTNF7Q9BXJ2 289 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 FZD8Q9H461 694 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 M0QX08 132 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 ERN1O75460 977 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 TACR2P21452 398 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 SMAD3P84022 425 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 SMARCB1Q12824 385 aa12.67□□□□□ -0.38
COL3A1-201ENST00000304636 TAF1AQ15573 450 aaPredicted RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
COL3A1-201ENST00000304636 VMP1Q96GC9 406 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms