RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 NDST3O95803 873 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CSN2P05814 226 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MTHFD1P11586 935 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SELPP16109 830 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CMPK1P30085 196 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AVPR1BP47901 424 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DRG2P55039 364 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CRY2Q49AN0 593 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AAGABQ6PD74 315 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 THAP5Q7Z6K1 395 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FITM2Q8N6M3 262 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TRMT61BQ9BVS5 477 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ABCB8Q9NUT2 735 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FZD10Q9ULW2 581 aa13.41□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ANGPTL1O95841 491 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SMPD1P17405 629 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PTNP21246 168 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DDX6P26196 483 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PPP1R15BQ5SWA1 713 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TNFAIP8L2Q6P589 184 aaPredicted RBP13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 METTL21AQ8WXB1 218 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 EURLQ9NYK6 297 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 COLEC10Q9Y6Z7 277 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARHGDIBP52566 201 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 BNC1Q01954 994 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GNA12Q03113 381 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HYAL2Q12891 473 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 IQCHQ86VS3 1027 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 UNC5BQ8IZJ1 945 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GRHL3Q8TE85 626 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MTERF1Q99551 399 aaKnown RBP13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARHGEF4Q9NR80 690 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CFAP20Q9Y6A4 193 aaKnown RBP13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FADS2P1A8MWK0 482 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 B4GALT4O60513 344 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ALOX5P09917 674 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CES1P23141 567 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SP140Q13342 867 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 VITQ6UXI7 678 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LCN9Q8WX39 176 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 NUDT4Q9NZJ9 180 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DERAQ9Y315 318 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RIIAD1A6NNX1 92 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CCNKO75909 580 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FCER2P06734 321 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LYNP07948 512 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF8P17098 575 aaPredicted RBP13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AQP4P55087 323 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SLC9B1Q4ZJI4 515 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 IDNKQ5T6J7 187 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF366Q8N895 744 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HMGXB4Q9UGU5 601 aa13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MRTO4Q9UKD2 239 aaKnown RBP13.4□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FAM240BA0A1B0GVZ2 78 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 C5orf60A6NFR6 353 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RHPN2P1A8MT19 583 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TBX18O95935 607 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC1A2P43004 574 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TLR1Q15399 786 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CLCC1Q96S66 551 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PLEKHA1Q9HB21 404 aa13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 APOBEC3GQ9HC16 384 aaKnown RBP13.4□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FAM237AA0A1B0GTK4 181 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 MTX2O75431 263 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CREB1P16220 341 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PPM1AP35813 382 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ACAP2Q15057 778 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 DUSP28Q4G0W2 176 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OR5AK3PQ8NH89 298 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RIPOR3Q96MK2 946 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PNO1Q9NRX1 252 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 KCND1Q9NSA2 647 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TVP23BQ9NYZ1 205 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 COL3A1P02461 1466 aaPredicted RBP13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC38A8A6NNN8 435 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 AP2S1P53680 142 aaPredicted RBP13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SDCBP2Q9H190 292 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FAM83DQ9H4H8 585 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CCNB1IP1Q9NPC3 277 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PLIN3O60664 434 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CCNB2O95067 398 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 HOXC6P09630 235 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RHOQP17081 205 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SDC2P34741 201 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 AIF1P55008 147 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 DEFB119Q8N690 84 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 WDR12Q9GZL7 423 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OR2AG1Q9H205 316 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TGDSO95455 350 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 IFNW1P05000 195 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CSKP41240 450 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CBX5P45973 191 aa13.39□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NAA20P61599 178 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms