RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 UPK3BL1B0FP48 263 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 UPK3BL2E5RIL1 263 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 LSM1O15116 133 aaKnown RBP11.58□□□□□ -0.56
RHO-201ENST00000296271 CXCL14O95715 111 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 CAPNS1P04632 268 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 TFAP2AP05549 437 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 ERVK-8P63133 956 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 TRAP1Q12931 704 aaKnown RBP11.58□□□□□ -0.56
RHO-201ENST00000296271 AP5B1Q2VPB7 878 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 ATP6AP1LQ52LC2 224 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 GPRC6AQ5T6X5 926 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 ZNF697Q5TEC3 545 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 OGFOD2Q6N063 350 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 TXNDC11Q6PKC3 985 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 ZNF783Q6ZMS7 281 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 HTR3DQ70Z44 454 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 MILR1Q7Z6M3 343 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 FAM217AQ8IXS0 508 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 CMTR2Q8IYT2 770 aaKnown RBP11.58□□□□□ -0.56
RHO-201ENST00000296271 MINDY1Q8N5J2 469 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 KRTCAP2Q8N6L1 136 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 BEND7Q8N7W2 519 aaPredicted RBP11.58□□□□□ -0.56
RHO-201ENST00000296271 OR2AP1Q8NGE2 309 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 SEPHS2Q99611 448 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 GRIP2Q9C0E4 1043 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 RETREG1Q9H6L5 497 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 PTBP2Q9UKA9 531 aaKnown RBP11.58□□□□□ -0.56
RHO-201ENST00000296271 VPS9D1Q9Y2B5 631 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 PTPRSQ13332 1948 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ZBBXA8MT70 800 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 LOC730098B7Z3J9 87 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 CHEK2O96017 543 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 LRG1P02750 347 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 LINC00271P0C7V0 271 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ITGALP20701 1170 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 CCR7P32248 378 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 NEK2P51955 445 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ADARP55265 1226 aaKnown RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 RPL38P63173 70 aaKnown RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 HSPA14Q0VDF9 509 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ARHGEF7Q14155 803 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 CBX2Q14781 532 aaPredicted RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 TMEM215Q68D42 235 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ST13P4Q8IZP2 240 aaPredicted RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 RBFAQ8N0V3 343 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 NXPE1Q8N323 547 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ZBTB2Q8N680 514 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 CYB5D2Q8WUJ1 264 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 PAWRQ96IZ0 340 aaKnown RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 BEGAINQ9BUH8 593 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ALG2Q9H553 416 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ATP13A3Q9H7F0 1226 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 DUS2Q9NX74 493 aaKnown RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 NUDT4Q9NZJ9 180 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 HSFX1Q9UBD0 423 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 KLQ9UEF7 1012 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 BCAP29Q9UHQ4 241 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 LSM7Q9UK45 103 aaKnown RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 USP34Q70CQ2 3546 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 KIAA1671Q9BY89 1806 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 DHRS12A0PJE2 317 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 DLGAP1O14490 977 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 PFDN6O15212 129 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 CLTBP09497 229 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 SLC2A4P14672 509 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 SLC5A9Q2M3M2 681 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 CYP20A1Q6UW02 462 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 ADGRG5Q8IZF4 528 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 CBR4Q8N4T8 237 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 TMEM199Q8N511 208 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 FIBINQ8TAL6 211 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 SKA2Q8WVK7 121 aaPredicted RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 LMLNQ96KR4 655 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 BRINP2Q9C0B6 783 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 ZBP1Q9H171 429 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 RPF2Q9H7B2 306 aaKnown RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 SLC6A13Q9NSD5 602 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 WWOXQ9NZC7 414 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 KIAA1522Q9P206 1035 aaPredicted RBP11.57□□□□□ -0.56
RHO-201ENST00000296271 CCL27Q9Y4X3 112 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 NEUROG3Q9Y4Z2 214 aa11.57□□□□□ -0.56
RHO-201ENST00000296271 PLXNB3Q9ULL4 1909 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 TRBV5-4A0A0C4DH59 114 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 BBIP1A8MTZ0 92 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 ANKRD28O15084 1053 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 IGSF6O95976 241 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 LAG3P18627 525 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 EPORP19235 508 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 HRH2P25021 359 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 PPP3CCP48454 512 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 CDH15P55291 814 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 PCBP2Q15366 365 aaKnown RBP eCLIP11.56□□□□□ -0.56
RHO-201ENST00000296271 TEAD2Q15562 447 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 CPSF6Q16630 551 aaKnown RBP eCLIP11.56□□□□□ -0.56
RHO-201ENST00000296271 CYP51A1Q16850 503 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 MYLK3Q32MK0 819 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 GTDC1Q4AE62 458 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 PABPC1LQ4VXU2 614 aaKnown RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 MPPE1Q53F39 396 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms