RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 JAK1P23458 1154 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 CXorf57Q6NSI4 855 aaKnown RBP16.39■□□□□ 0.21
RPN1-201ENST00000296255 FAM117BQ6P1L5 589 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 NCEH1Q6PIU2 408 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 FRA10AC1Q70Z53 315 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 CROCCP3Q8IVE0 287 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 LEMD2Q8NC56 503 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 NACA2Q9H009 215 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 NSUN3Q9H649 340 aaKnown RBP16.39■□□□□ 0.21
RPN1-201ENST00000296255 RETREG1Q9H6L5 497 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 IPPKQ9H8X2 491 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 SMPD4Q9NXE4 827 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 IL17CQ9P0M4 197 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 COMMD10Q9Y6G5 202 aa16.39■□□□□ 0.21
RPN1-201ENST00000296255 TAPBPO15533 448 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 ADAM12O43184 909 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 COCHO43405 550 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 DEAF1O75398 565 aaPredicted RBP16.38■□□□□ 0.21
RPN1-201ENST00000296255 MATN1P21941 496 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 NFKBIAP25963 317 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 CST5P28325 142 aaPredicted RBP16.38■□□□□ 0.21
RPN1-201ENST00000296255 SLC11A1P49279 550 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 IST1P53990 364 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 PTGR1Q14914 329 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 ZNF773Q6PK81 442 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 PRSS55Q6UWB4 352 aaPredicted RBP16.38■□□□□ 0.21
RPN1-201ENST00000296255 ENPP6Q6UWR7 440 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 STK32CQ86UX6 486 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 TMEM173Q86WV6 379 aaPredicted RBP16.38■□□□□ 0.21
RPN1-201ENST00000296255 TBC1D15Q8TC07 691 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 TANKQ92844 425 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 IKZF5Q9H5V7 419 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 LTB4R2Q9NPC1 389 aa16.38■□□□□ 0.21
RPN1-201ENST00000296255 DNAAF2Q9NVR5 837 aaKnown RBP16.38■□□□□ 0.21
RPN1-201ENST00000296255 FFAR2O15552 330 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 BMP1P13497 986 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 ITGB6P18564 788 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 CORO1AP31146 461 aaKnown RBP16.37■□□□□ 0.21
RPN1-201ENST00000296255 MTHFRP42898 656 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 HSPA7P48741 367 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 PRKCZQ05513 592 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 CACNG1Q06432 222 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 CBX2Q14781 532 aaPredicted RBP16.37■□□□□ 0.21
RPN1-201ENST00000296255 FAM98BQ52LJ0 330 aaKnown RBP16.37■□□□□ 0.21
RPN1-201ENST00000296255 FUT10Q6P4F1 479 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 TTC16Q8NEE8 873 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 OR8J3Q8NGG0 315 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 OR13F1Q8NGS4 319 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 LKAAEAR1Q8TD35 194 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 SGCDQ92629 289 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 C17orf80Q9BSJ5 609 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 TMEM161AQ9NX61 479 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 UTS2RQ9UKP6 389 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 TNPO3Q9Y5L0 923 aaKnown RBP16.37■□□□□ 0.21
RPN1-201ENST00000296255 ZNF840PA6NDX5 716 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 PRMT5O14744 637 aaPredicted RBP16.37■□□□□ 0.21
RPN1-201ENST00000296255 STC2O76061 302 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 GUCA1CO95843 209 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 THRBP10828 461 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 SLC2A4P14672 509 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 PIK3CGP48736 1102 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 MAPK10P53779 464 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 GRSF1Q12849 480 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPN1-201ENST00000296255 ADAMTSL2Q86TH1 951 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 FIG4Q92562 907 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPN1-201ENST00000296255 THAP11Q96EK4 314 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 CCDC115Q96NT0 180 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 TUBA1CQ9BQE3 449 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 FANCEQ9HB96 536 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 LHX3Q9UBR4 397 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 PCDHB9Q9Y5E1 797 aa16.37■□□□□ 0.21
RPN1-201ENST00000296255 A0A1B0GVM2 712 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 IFRD1O00458 451 aaPredicted RBP16.36■□□□□ 0.21
RPN1-201ENST00000296255 OTCP00480 354 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 MBL2P11226 248 aaPredicted RBP16.36■□□□□ 0.21
RPN1-201ENST00000296255 CTPS1P17812 591 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 RPL38P63173 70 aaKnown RBP16.36■□□□□ 0.21
RPN1-201ENST00000296255 CAP1Q01518 475 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 CHRNB3Q05901 458 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 ANKRD34AQ69YU3 496 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 XAF1Q6GPH4 301 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 XKR5Q6UX68 686 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 Q6ZNX1 250 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 CHST9Q7L1S5 443 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 MILR1Q7Z6M3 343 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 MSRB3Q8IXL7 192 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 CLEC4FQ8N1N0 589 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 PCSK9Q8NBP7 692 aaKnown RBP16.36■□□□□ 0.21
RPN1-201ENST00000296255 PNPT1Q8TCS8 783 aaKnown RBP16.36■□□□□ 0.21
RPN1-201ENST00000296255 SLC13A3Q8WWT9 602 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 GTF2H4Q92759 462 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 CASD1Q96PB1 797 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 BOCQ9BWV1 1114 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 CIPCQ9C0C6 399 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 TOR3AQ9H497 397 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 GORASP2Q9H8Y8 452 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 SMURF2Q9HAU4 748 aa16.36■□□□□ 0.21
RPN1-201ENST00000296255 FARSBQ9NSD9 589 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms