RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TET1Q8NFU7 2136 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 TCRBV7S2A1N4TA0A589 114 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 MDM4O15151 490 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 SH3BGRLO75368 114 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 FSHRP23945 695 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 SDC2P34741 201 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 HNMTP50135 292 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 SKP1P63208 163 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC8B1Q6J4K2 584 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 CYP20A1Q6UW02 462 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PTCD2Q8WV60 388 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 HDAC10Q969S8 669 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNF607Q96SK3 696 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZYG11BQ9C0D3 744 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 CAB39LQ9H9S4 337 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 CD320Q9NPF0 282 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 GRHL1Q9NZI5 618 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 INSL5Q9Y5Q6 135 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ARHGEF33A8MVX0 844 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 KCNU1A8MYU2 1149 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PRMT5O14744 637 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 TGM5O43548 720 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 LPOP22079 712 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 FAUP35544 74 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 CDKN2BP42772 138 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 LIMK2P53671 638 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 WNT3AP56704 352 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 RPL26P61254 145 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PDCD4Q53EL6 469 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZYG11AQ6WRX3 759 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ANKS1BQ7Z6G8 1248 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZZZ3Q8IYH5 903 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 MEIOBQ8N635 442 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZNF557Q8N988 423 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 JOSD2Q8TAC2 188 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 C1GALT1C1Q96EU7 318 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 FNDC11Q9BVV2 318 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 KAT8Q9H7Z6 458 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PLK2Q9NYY3 685 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PDE10AQ9Y233 779 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 MYH15Q9Y2K3 1946 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 WWP2O00308 870 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 BUD23O43709 281 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 NR2F1P10589 423 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 EPCAMP16422 314 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 COPZ1P61923 177 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 LIPEQ05469 1076 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 CDK18Q07002 472 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 MTAPQ13126 283 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC25A24Q6NUK1 477 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 UTS2BQ765I0 119 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 GET4Q7L5D6 327 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 TMEM173Q86WV6 379 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 ERI1Q8IV48 349 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 PARP8Q8N3A8 854 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 UBR7Q8N806 425 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 BANPQ8N9N5 519 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 PIK3R3Q92569 461 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 TMCO6Q96DC7 493 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 HSFX1Q9UBD0 423 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 ZFP37Q9Y6Q3 630 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 PMM2O15305 246 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 PAPSS1O43252 624 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 POLR2JP52435 117 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 HYAL1Q12794 435 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 BIKQ13323 160 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 ADAM15Q13444 863 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SIM2Q14190 667 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 DLG2Q15700 870 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 TCEAL8Q8IYN2 117 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 CCDC185Q8N715 623 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SKA1Q96BD8 255 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 S100A13Q99584 98 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 PCDH12Q9NPG4 1184 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 MICAL3Q7RTP6 2002 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 PPEF2O14830 753 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SEMA3DO95025 777 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SCELO95171 688 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 S100A6P06703 90 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 EPORP19235 508 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 MAGP20916 626 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 CES1P23141 567 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 HOXA9P31269 272 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 GSCP56915 257 aaPredicted RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 CPSF6Q16630 551 aaKnown RBP eCLIP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 LSM12Q3MHD2 195 aaKnown RBP11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SVOPLQ8N434 492 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC4A11Q8NBS3 891 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 VN1R2Q8NFZ6 395 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 OR4L1Q8NH43 312 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 C10orf82Q8WW14 230 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 TAMM41Q96BW9 452 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 PPM1MQ96MI6 270 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 FBXW11Q9UKB1 542 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 CARD8Q9Y2G2 431 aa11.69□□□□□ -0.54
SYNGAP1-201ENST00000293748 RBMX2Q9Y388 322 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms