RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 MBLAC2Q68D91 279 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 LIN54Q6MZP7 749 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 POP5Q969H6 163 aaKnown RBP17.06■□□□□ 0.32
SHANK1-201ENST00000293441 MYOM1P52179 1685 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
SHANK1-201ENST00000293441 CPED1A4D0V7 1026 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 FAM25EA8MYX2 175 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 CCR10P46092 362 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 YAP1P46937 504 aaKnown RBP17.06■□□□□ 0.32
SHANK1-201ENST00000293441 TRMT61BQ9BVS5 477 aaKnown RBP17.06■□□□□ 0.32
SHANK1-201ENST00000293441 CCSER2Q9H7U1 834 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 GMEB2Q9UKD1 530 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 PLIN4Q96Q06 1357 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 ACP5P13686 325 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 PSMA8Q8TAA3 256 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 PCDH19Q8TAB3 1148 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 AP3S1Q92572 193 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 DPYSL5Q9BPU6 564 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 PNPLA3Q9NST1 481 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 IRGMA1A4Y4 181 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 ESR1P03372 595 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 SYPL2Q5VXT5 272 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 CXorf57Q6NSI4 855 aaKnown RBP17.06■□□□□ 0.32
SHANK1-201ENST00000293441 WDR26Q9H7D7 661 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 CKLFQ9UBR5 152 aa17.06■□□□□ 0.32
SHANK1-201ENST00000293441 WNT9AO14904 365 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 PRKCHP24723 683 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 DCST1Q5T197 706 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 ADGRD1Q6QNK2 874 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 PNO1Q9NRX1 252 aaKnown RBP17.05■□□□□ 0.32
SHANK1-201ENST00000293441 DTLQ9NZJ0 730 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 NOCTQ9UK39 431 aaKnown RBP17.05■□□□□ 0.32
SHANK1-201ENST00000293441 AP4B1Q9Y6B7 739 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 CASKO14936 926 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 DCLK1O15075 740 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 PGRMC2O15173 223 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 TNFRSF21O75509 655 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 IGFBP5P24593 272 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 TTKP33981 857 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 CHRNA4P43681 627 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 HEPACAMQ14CZ8 416 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 PDGFRLQ15198 375 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 QPCTQ16769 361 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 PIP5K1BO14986 540 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 RBMXL2O75526 392 aaKnown RBP17.05■□□□□ 0.32
SHANK1-201ENST00000293441 ALPIP09923 528 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 ACTR1BP42025 376 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 NRLP54845 237 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 ACTR1AP61163 376 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 ZNF483Q8TF39 744 aaPredicted RBP17.05■□□□□ 0.32
SHANK1-201ENST00000293441 SUV39H2Q9H5I1 410 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 UBXN7O94888 489 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 COL6A1P12109 1028 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 CAPGP40121 348 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 SLC1A2P43004 574 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 PTP4A2Q12974 167 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 RFTN1Q14699 578 aaPredicted RBP17.05■□□□□ 0.32
SHANK1-201ENST00000293441 ZNF366Q8N895 744 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 CCDC28BQ9BUN5 200 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 GTPBP2Q9BX10 602 aaKnown RBP17.05■□□□□ 0.32
SHANK1-201ENST00000293441 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 SLIT2O94813 1529 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 METTL18O95568 372 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 MLLT3P42568 568 aaPredicted RBP17.05■□□□□ 0.32
SHANK1-201ENST00000293441 FAM110BQ8TC76 370 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 RNF31Q96EP0 1072 aa17.05■□□□□ 0.32
SHANK1-201ENST00000293441 INTS10Q9NVR2 710 aaKnown RBP17.05■□□□□ 0.32
SHANK1-201ENST00000293441 ANKRD26Q9UPS8 1709 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 GDF10P55107 478 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 TMPRSS11AQ6ZMR5 421 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 ARMCX6Q7L4S7 300 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 ZBTB46Q86UZ6 589 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 RASGRP3Q8IV61 690 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 C1GALT1C1Q96EU7 318 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 SUSD3Q96L08 255 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 LRRC32Q14392 662 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 PERM1Q5SV97 790 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 TXNDC8Q6A555 127 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 SLC8B1Q6J4K2 584 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 COX18Q8N8Q8 333 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 OR13C4Q8NGS5 318 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 FAM192AQ9GZU8 254 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 DYTNA2CJ06 578 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 IRAK2O43187 625 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 WFS1O76024 890 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 PNLIPRP1P54315 467 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 ADARP55265 1226 aaKnown RBP17.04■□□□□ 0.32
SHANK1-201ENST00000293441 NFATC2Q13469 925 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 FAM81AQ8TBF8 368 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 TMEM175Q9BSA9 504 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 A0A0G2JN53 185 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 RIIAD1A6NNX1 92 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 HAT1O14929 419 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 PSIP1O75475 530 aaKnown RBP17.04■□□□□ 0.32
SHANK1-201ENST00000293441 NRIP1P48552 1158 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 LPCAT4Q643R3 524 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 DEFB119Q8N690 84 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 ZNF781Q8N8C0 355 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 POC5Q8NA72 575 aa17.04■□□□□ 0.32
SHANK1-201ENST00000293441 OR2T34Q8NGX1 318 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms