RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 DGKEP52429 567 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 CNTN1Q12860 1018 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 LHX8Q68G74 356 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 AHSA2Q719I0 299 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 PROSER1Q86XN7 944 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 DENND6AQ8IWF6 608 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF516Q92618 1163 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 SSR3Q9UNL2 185 aa11.24□□□□□ -0.61
NPC1L1-201ENST00000289547 H3BMM5 538 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 K7EPI3 171 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 ELFN1P0C7U0 828 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 LINC00032P0C843 101 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 HOXD8P13378 290 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC18A1P54219 525 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 OLR1P78380 273 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 CTBP1Q13363 440 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 COLEC12Q5KU26 742 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 CUZD1Q86UP6 607 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 DEPDC4Q8N2C3 294 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 ZFP28Q8NHY6 868 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 GFM1Q96RP9 751 aaKnown RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 GKN1Q9NS71 199 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 CLN6Q9NWW5 311 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 TMEM216Q9P0N5 145 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 PEX16Q9Y5Y5 336 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 BBIP1A8MTZ0 92 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 C9JVG2 144 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 AZIN1O14977 448 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 GPIP06744 558 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 GOT1P17174 413 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 PFKLP17858 780 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 L1CAMP32004 1257 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC9A5Q14940 896 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 VPS26BQ4G0F5 336 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 ADGRF1Q5T601 910 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 LYPLAL1Q5VWZ2 237 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 BICRALQ6AI39 1079 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 B3GNT9Q6UX72 402 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 RALGPS2Q86X27 583 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 DPP10Q8N608 796 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 CD101Q93033 1021 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 CMTM6Q9NX76 183 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 IFT80Q9P2H3 777 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 BCLAF3A2AJT9 711 aaKnown RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 TMEM189-UBE2V1I3L0A0 370 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 CLPXO76031 633 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 BMP10O95393 424 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 POP4O95707 220 aaKnown RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 PRKCQQ04759 706 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 TGFBIQ15582 683 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 TAS1R3Q7RTX0 852 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 CYP4Z2PQ8N1L4 340 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 GALNT6Q8NCL4 622 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 SCAMP5Q8TAC9 235 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 HEXDCQ8WVB3 486 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 PPM1MQ96MI6 270 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 NLNQ9BYT8 704 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 FNIP2Q9P278 1114 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 M0QX08 132 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 OAZ2O95190 189 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 S100A6P06703 90 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 PABPC1P11940 636 aaKnown RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC7A1P30825 629 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 MAPK9P45984 424 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 NDST2P52849 883 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 INCA1Q0VD86 236 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 SHHQ15465 462 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 OSTM1Q86WC4 334 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 PIK3C3Q8NEB9 887 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 OR2T12Q8NG77 320 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 OR14C36Q8NHC7 312 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 DIRAS2Q96HU8 199 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 LGMNQ99538 433 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 HEPHQ9BQS7 1158 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 PHPT1Q9NRX4 125 aaPredicted RBP11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 ADGRE2Q9UHX3 823 aa11.23□□□□□ -0.61
NPC1L1-201ENST00000289547 DOCK1Q14185 1865 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 TGM5O43548 720 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 NTRK1P04629 796 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 CD86P42081 329 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 DLG2Q15700 870 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 REP15Q6BDI9 236 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 HDAC2Q92769 488 aaKnown RBP11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 CD320Q9NPF0 282 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 FAIMQ9NVQ4 179 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 DYRK1BQ9Y463 629 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 MYH4Q9Y623 1939 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 IDO1P14902 403 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 HOXD12P35452 270 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 HNF4AP41235 474 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 RXRGP48443 463 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 LIPEQ05469 1076 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC18A2Q05940 514 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 CCNIQ14094 377 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 PCID2Q5JVF3 399 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms