RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CHPT1Q8WUD6 406 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 HDAC2Q92769 488 aaKnown RBP13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 SPON2Q9BUD6 331 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 CINPQ9BW66 212 aaPredicted RBP13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 DGCR6LQ9BY27 220 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 AMBRA1Q9C0C7 1298 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 RAD21L1Q9H4I0 556 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 ARMC7Q9H6L4 198 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 TMEM45AQ9NWC5 275 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 LIMD1Q9UGP4 676 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 DGKBQ9Y6T7 804 aa13.05□□□□□ -0.32
SLC28A1-201ENST00000286749 E5RI56 91 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 SULT1C4O75897 302 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 CST1P01037 141 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 IGLV3-27P01718 113 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 PAX3P23760 479 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 BCAP31P51572 246 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 PHEXP78562 749 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 TAF10Q12962 218 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 SPCS2Q15005 226 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 ABRAXAS2Q15018 415 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 C6orf141Q5SZD1 244 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 TTC23Q5W5X9 447 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 GOLGA7Q7Z5G4 137 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 OR4F6Q8NGB9 312 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 AURKBQ96GD4 344 aaPredicted RBP13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 FUBP3Q96I24 572 aaKnown RBP eCLIP13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 PALMDQ9NP74 551 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 SEPT3Q9UH03 358 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 VWA8A3KMH1 1905 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 MOXD2PA6NHM9 499 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 C16orf96A6NNT2 1141 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 GPR39O43194 453 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 TBC1D4O60343 1298 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 PRLP01236 227 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 TTPAP49638 278 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 KCNQ1P51787 676 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 ITGADQ13349 1161 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 NFE2Q16621 373 aaPredicted RBP13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 ZNF555Q8NEP9 628 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 OR8J3Q8NGG0 315 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 OR10A6Q8NH74 314 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 MAGED4Q96JG8 741 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 OSBPL10Q9BXB5 764 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 UGT2B28Q9BY64 529 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 DNAJB9Q9UBS3 223 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 UBA2Q9UBT2 640 aaPredicted RBP13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 PDE10AQ9Y233 779 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 VPS9D1Q9Y2B5 631 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 PCDHB5Q9Y5E4 795 aa13.04□□□□□ -0.32
SLC28A1-201ENST00000286749 F5H5T6 163 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 OR7A17O14581 309 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 INSIG1O15503 277 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 OAZ2O95190 189 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 AKR1A1P14550 325 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 AGXTP21549 392 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 LPOP22079 712 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 AQP6Q13520 282 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 PTGR1Q14914 329 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 RGS21Q2M5E4 152 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 SPRYD7Q5W111 196 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 SPESP1Q6UW49 350 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 DNAJC14Q6Y2X3 702 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 FRA10AC1Q70Z53 315 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 NECAB2Q7Z6G3 386 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 RBM23Q86U06 439 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 IGFN1Q86VF2 1251 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 SLC47A1Q96FL8 570 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 CCDC115Q96NT0 180 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 PSKH2Q96QS6 385 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 THUMPD3Q9BV44 507 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 FUNDC2Q9BWH2 189 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 IKZF5Q9H5V7 419 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 OLA1Q9NTK5 396 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 ADGRE2Q9UHX3 823 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 ZMYM5Q9UJ78 669 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 ERGIC3Q9Y282 383 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 PRG3Q9Y2Y8 225 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 PCDHGC4Q9Y5F7 938 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 ST14Q9Y5Y6 855 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 COMMD10Q9Y6G5 202 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 SOBPA7XYQ1 873 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 GNGT2O14610 69 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 XYLBO75191 536 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 JAK1P23458 1154 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 ARPP19P56211 112 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 RPL38P63173 70 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 PPP2R2BQ00005 443 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 CD47Q08722 323 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 KCNAB2Q13303 367 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 EGFLAMQ63HQ2 1017 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 ZNF548Q8NEK5 533 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 ABHD11Q8NFV4 315 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 SLC13A3Q8WWT9 602 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 CCDC138Q96M89 665 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 RDH12Q96NR8 316 aa13.03□□□□□ -0.32
SLC28A1-201ENST00000286749 TBCDQ9BTW9 1192 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms