RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ZNF225Q9UK10 706 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 TRAF6Q9Y4K3 522 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 PCDHB1Q9Y5F3 818 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 F8W8V4 182 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 LATO43561 262 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 SYNCRIPO60506 623 aaKnown RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 ESRRAP11474 423 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 PPARGP37231 505 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 KIR2DL1P43626 348 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 ADARP55265 1226 aaKnown RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 TAS2R38P59533 333 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 DNAJB13P59910 316 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CLCQ05315 142 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CCSMST1Q4G0I0 132 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 PREPLQ4J6C6 727 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 TMEM196Q5HYL7 178 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CYHR1Q6ZMK1 362 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 RIPOR1Q6ZS17 1223 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 LCA5Q86VQ0 697 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 DDIASQ8IXT1 998 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 MYO1HQ8N1T3 1032 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CLPTM1LQ96KA5 538 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CNDP1Q96KN2 507 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 SLC40A1Q9NP59 571 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 TM7SF3Q9NS93 570 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 OR1A2Q9Y585 309 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 AREL1O15033 823 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CCNT2O60583 730 aaKnown RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 ADAM23O75077 832 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 KLF8O95600 359 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 ZNF30P17039 623 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 SLC26A3P40879 764 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 MTHFRP42898 656 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 GPR1P46091 355 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 ATP6V0D1P61421 351 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 TMEM115Q12893 351 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CST6Q15828 149 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 ZXDCQ2QGD7 858 aaPredicted RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 PIP5KL1Q5T9C9 394 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 TMEM220Q6QAJ8 160 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 MACC1Q6ZN28 852 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CDYL2Q8N8U2 506 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 RHEBL1Q8TAI7 183 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 GLYATL1Q969I3 302 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 HGH1Q9BTY7 390 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CCDC106Q9BWC9 280 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 DKK3Q9UBP4 350 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CD207Q9UJ71 328 aa10.79□□□□□ -0.68
GGPS1-201ENST00000282841 CNOT6Q9ULM6 557 aaKnown RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 NDRG2Q9UN36 371 aaKnown RBP10.79□□□□□ -0.68
GGPS1-201ENST00000282841 TSPAN11A1L157 253 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 B2RBV5 119 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 FFAR2O15552 330 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 NPHS1O60500 1241 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 RAB44Q7Z6P3 723 aaPredicted RBP10.78□□□□□ -0.68
GGPS1-201ENST00000282841 TRAPPC5Q8IUR0 188 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 SLC22A9Q8IVM8 553 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 RAVER1Q8IY67 606 aaKnown RBP10.78□□□□□ -0.68
GGPS1-201ENST00000282841 SLC44A3Q8N4M1 653 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 IL17RCQ8NAC3 791 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 TMIEQ8NEW7 156 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 NUDT8Q8WV74 236 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 BTN2A2Q8WVV5 523 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 NUS1Q96E22 293 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 PTCD3Q96EY7 689 aaKnown RBP10.78□□□□□ -0.68
GGPS1-201ENST00000282841 DTD2Q96FN9 168 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 NSL1Q96IY1 281 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 ATG10Q9H0Y0 220 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 NOL11Q9H8H0 719 aaKnown RBP10.78□□□□□ -0.68
GGPS1-201ENST00000282841 MBNL1Q9NR56 388 aaKnown RBP10.78□□□□□ -0.68
GGPS1-201ENST00000282841 DNAJC15Q9Y5T4 150 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 RGSL1A5PLK6 1076 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 CAPN14A8MX76 684 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 SDHDO14521 159 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 FFAR3O14843 346 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 CHUKO15111 745 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 GPR42O15529 346 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 TAPBPO15533 448 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 SORBS2O94875 1100 aaKnown RBP10.78□□□□□ -0.68
GGPS1-201ENST00000282841 OR4F21O95013 312 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 FSBPO95073 299 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 OR56A5P0C7T3 313 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 RPS3P23396 243 aaKnown RBP eCLIP10.78□□□□□ -0.687e-7■■■■□ 25.3
GGPS1-201ENST00000282841 DGKAP23743 735 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 SLC25A3Q00325 362 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 SYVN1Q86TM6 617 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 LONP2Q86WA8 852 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 TEX9Q8N6V9 391 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 GBP7Q8N8V2 638 aaPredicted RBP10.78□□□□□ -0.68
GGPS1-201ENST00000282841 OR14C36Q8NHC7 312 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 LRIG1Q96JA1 1093 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 COQ10AQ96MF6 247 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 TBC1D10AQ9BXI6 508 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 PRO3102Q9H379 93 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 TUBB1Q9H4B7 451 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 DNAJC28Q9NX36 388 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 CA5BQ9Y2D0 317 aa10.78□□□□□ -0.68
GGPS1-201ENST00000282841 PIP5K1BO14986 540 aa10.77□□□□□ -0.69
GGPS1-201ENST00000282841 H2AFYO75367 372 aaKnown RBP10.77□□□□□ -0.69
GGPS1-201ENST00000282841 SERPINA6P08185 405 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms