RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ROPN1LQ96C74 230 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 SPATC1LQ9H0A9 340 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 UCKL1Q9NWZ5 548 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 RPL36Q9Y3U8 105 aaKnown RBP8.63□□□□□ -1.03
NIPBL-201ENST00000282516 BTBD19C9JJ37 291 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 MAPK3P27361 379 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-201ENST00000282516 CAP2P40123 477 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 PGDP52209 483 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 GBX2P52951 348 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-201ENST00000282516 SCIMPQ6UWF3 145 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 ART4Q93070 314 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 SENP8Q96LD8 212 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 KCTD7Q96MP8 289 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF558Q96NG5 402 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 TOR3AQ9H497 397 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 GBA2Q9HCG7 927 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-201ENST00000282516 REXO2Q9Y3B8 237 aaKnown RBP8.63□□□□□ -1.03
NIPBL-201ENST00000282516 ABCC3O15438 1527 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 GLYATL1P3A0A0U1RQE8 302 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 CPNE3O75131 537 aaKnown RBP8.63□□□□□ -1.03
NIPBL-201ENST00000282516 MAN2A2P49641 1150 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 IKBKEQ14164 716 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 SLC30A10Q6XR72 485 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 PGAM4Q8N0Y7 254 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 TMX2Q9Y320 296 aa8.63□□□□□ -1.03
NIPBL-201ENST00000282516 CLCA1A8K7I4 914 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ARP10275 920 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CMPK1P30085 196 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 SLC20A2Q08357 652 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CBR4Q8N4T8 237 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CNTD1Q8N815 330 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CORO1BQ9BR76 489 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TMPRSS4Q9NRS4 437 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CYTH4Q9UIA0 394 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3DA0A087WVF3 549 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3IA0A087WXS9 549 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3EA0A087X179 549 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3KA0A087X1G2 549 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TCRBV9S1A1TA0A576 114 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 RBM47A0AV96 593 aaKnown RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3FA6NER0 549 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3LB9A6J9 549 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 BHMG1C9JSJ3 638 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 HMGN1P05114 100 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3HP0C7X1 549 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TAS2R50P59544 299 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3GQ6DHY5 549 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3CQ6IPX1 549 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TBC1D3Q8IZP1 549 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TOMM5Q8N4H5 51 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CDT1Q9H211 546 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ALG2Q9H553 416 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 USP32Q8NFA0 1604 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 EFCAB9A8MZ26 197 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 DISC1C4P0D8 188 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PTPN9P43378 593 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TLE2Q04725 743 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 AUHQ13825 339 aaKnown RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CREB3L1Q96BA8 519 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 C8orf48Q96LL4 319 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 RIPOR3Q96MK2 946 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TRIM36Q9NQ86 728 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 NR2E1Q9Y466 385 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 GMFGO60234 142 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ENTPD6O75354 484 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PPM1BO75688 479 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 DLG2Q15700 870 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PROKR2Q8NFJ6 384 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 KCTD15Q96SI1 283 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 MIPEPQ99797 713 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ULBP1Q9BZM6 244 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ANKHQ9HCJ1 492 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PCDHB16Q9NRJ7 776 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PRKAB1Q9Y478 270 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TLL2Q9Y6L7 1015 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 MYO3AQ8NEV4 1616 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 DLC1Q96QB1 1528 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 NUDT17P0C025 328 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 AKR1A1P14550 325 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 LCP2Q13094 533 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 BLMHQ13867 455 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PRKD1Q15139 912 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 SCGB2B2Q4G0G5 96 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CFAP206Q8IYR0 622 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 BLOC1S4Q9NUP1 217 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CHD4Q14839 1912 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ELOA3DA6NLF2 546 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 YES1P07947 543 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 MXD1Q05195 221 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PUM1Q14671 1186 aaKnown RBP eCLIP8.62□□□□□ -1.039e-7■□□□□ 9.3
NIPBL-201ENST00000282516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.62□□□□□ -1.034e-7■■■□□ 17.3
NIPBL-201ENST00000282516 ELOA3BQ3SY89 546 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 WSCD1Q658N2 575 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 SLC22A15Q8IZD6 547 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 KIAA0895Q8NCT3 520 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ELOA3Q8NG57 546 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 SCGB1C1Q8TD33 95 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 GATAD2BQ8WXI9 593 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 THRSPQ92748 146 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms