RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 ZNF778Q96MU6 729 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 TGM7Q96PF1 710 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 GRPEL1Q9HAV7 217 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 CASS4Q9NQ75 786 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 SLC2A6Q9UGQ3 507 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 PILRAQ9UKJ1 303 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 COL6A6A6NMZ7 2263 aa14.11□□□□□ -0.15
HMGN3-201ENST00000275036 CEP104O60308 925 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 ANKRD34CP0C6C1 535 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 LIFP15018 202 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 AMD1P17707 334 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 MSNP26038 577 aaKnown RBP14.1□□□□□ -0.15
HMGN3-201ENST00000275036 FOXN2P32314 431 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 DBN1Q16643 649 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 DCAF12Q5T6F0 453 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 TAS2R42Q7RTR8 314 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 TIPARPQ7Z3E1 657 aaKnown RBP14.1□□□□□ -0.15
HMGN3-201ENST00000275036 CFAP206Q8IYR0 622 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 CLDN19Q8N6F1 224 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 CCDC89Q8N998 374 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 DNAAF3Q8N9W5 541 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 EXTL1Q92935 676 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 C12orf66Q96MD2 445 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 IMP3Q9NV31 184 aaKnown RBP14.1□□□□□ -0.15
HMGN3-201ENST00000275036 PAK5Q9P286 719 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 DRG1Q9Y295 367 aaKnown RBP14.1□□□□□ -0.15
HMGN3-201ENST00000275036 PRSS21Q9Y6M0 314 aa14.1□□□□□ -0.15
HMGN3-201ENST00000275036 CCDC162PA2VCL2 907 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 CFAP99D6REC4 459 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 E7EVH7 732 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 RAD1O60671 282 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 POLBP06746 335 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 APRTP07741 180 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 RALBP11234 206 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 LMAN1P49257 510 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 RAB15P59190 212 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 SH3BP2P78314 561 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 CACNG1Q06432 222 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 TSTD2Q5T7W7 516 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 CAPRIN2Q6IMN6 1127 aaKnown RBP14.09□□□□□ -0.15
HMGN3-201ENST00000275036 PPP1R21Q6ZMI0 780 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 REXO1L1PQ8IX06 675 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 PRELID2Q8N945 189 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 HM13Q8TCT9 377 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 HEXDCQ8WVB3 486 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 RANBP9Q96S59 729 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 SLC12A9Q9BXP2 914 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 ASPSCR1Q9BZE9 553 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 FBXO8Q9NRD0 319 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 EPHA6Q9UF33 1036 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 ACSL5Q9ULC5 683 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 PCDHB11Q9Y5F2 797 aa14.09□□□□□ -0.15
HMGN3-201ENST00000275036 C17orf113A0A1B0GUU1 675 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 HEATR9A2RTY3 570 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 KLHL33A6NCF5 533 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 PLA2G2AP14555 144 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 ZNF28P17035 718 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 PDHA2P29803 388 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 SEPHS1P49903 392 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 ACVR1Q04771 509 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 SKIDA1Q1XH10 827 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 IRGCQ6NXR0 463 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 FAM92BQ6ZTR7 304 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 ZNF534Q76KX8 674 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 PRSS42Q7Z5A4 293 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 CACNA2D3Q8IZS8 1091 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 HDAC10Q969S8 669 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 NRTNQ99748 197 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 CCM2Q9BSQ5 444 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 RAB33BQ9H082 229 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 OR52A5Q9H2C5 316 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 KCNF1Q9H3M0 494 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 ZNF768Q9H5H4 540 aaKnown RBP14.08□□□□□ -0.16
HMGN3-201ENST00000275036 COG4Q9H9E3 785 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 TCAF1Q9Y4C2 921 aa14.08□□□□□ -0.16
HMGN3-201ENST00000275036 LOC101059948A0A1B0GTJ6 334 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 TOX3O15405 576 aaPredicted RBP14.07□□□□□ -0.16
HMGN3-201ENST00000275036 NRDCO43847 1150 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 DLGAP3O95886 979 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 GOT2P00505 430 aaKnown RBP14.07□□□□□ -0.16
HMGN3-201ENST00000275036 SLC35G4P0C7Q5 338 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 ADRA1DP25100 572 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 PREPP48147 710 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 CRADDP78560 199 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 SEMA3AQ14563 771 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 TBR1Q16650 682 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 CACHD1Q5VU97 1274 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 UNC5BQ8IZJ1 945 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 RASGEF1CQ8N431 466 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 IL22RA1Q8N6P7 574 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 MAIP1Q8WWC4 291 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 KLHL6Q8WZ60 621 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 MED8Q96G25 268 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 MS4A14Q96JA4 679 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 TEFMQ96QE5 360 aaKnown RBP14.07□□□□□ -0.16
HMGN3-201ENST00000275036 KIR3DX1Q9H7L2 352 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 EIF2B3Q9NR50 452 aaKnown RBP14.07□□□□□ -0.16
HMGN3-201ENST00000275036 SMARCAL1Q9NZC9 954 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 SLC24A2Q9UI40 661 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms