RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 A0A0G2JMZ2 1700 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 LRRC37A2A6NM11 1700 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 B3GAT3O94766 335 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 PAPSS2O95340 614 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-202ENST00000273342 POMCP01189 267 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 KCNE1P15382 129 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 EPHA2P29317 976 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 GRIK1P39086 918 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 RENBPP51606 427 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 ERVK-8P63133 956 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 ADAM17P78536 824 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 NFKB2Q00653 900 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 DGUOKQ16854 277 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 LAIR1Q6GTX8 287 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 LETMD1Q6P1Q0 360 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 SPATA19Q7Z5L4 167 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 P2RY8Q86VZ1 359 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 ANKRD46Q86W74 232 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 PLD3Q8IV08 490 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 MFSD4AQ8N468 514 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 RTL3Q8N8U3 475 aaKnown RBP12.73□□□□□ -0.37
COL8A1-202ENST00000273342 GOLM1Q8NBJ4 401 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 EEF1AKMT1Q8WVE0 214 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 FUBP1Q96AE4 644 aaKnown RBP12.73□□□□□ -0.37
COL8A1-202ENST00000273342 MTFMTQ96DP5 389 aaKnown RBP12.73□□□□□ -0.37
COL8A1-202ENST00000273342 CNDP2Q96KP4 475 aaKnown RBP12.73□□□□□ -0.37
COL8A1-202ENST00000273342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL8A1-202ENST00000273342 RNF181Q9P0P0 153 aa12.73□□□□□ -0.37
COL8A1-202ENST00000273342 FAM234BA2RU67 622 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 BCKDKO14874 412 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 WISP3O95389 354 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 CHRNA1P02708 482 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 LCKP06239 509 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 CTSHP09668 335 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 PCMT1P22061 227 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 NEK2P51955 445 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ERVPABLB-1P60509 514 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 RPL38P63173 70 aaKnown RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 HMGCS1Q01581 520 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 CDK5R2Q13319 367 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 AP5B1Q2VPB7 878 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 FAM174BQ3ZCQ3 159 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 CYP20A1Q6UW02 462 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 GPRIN3Q6ZVF9 776 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 KRTCAP2Q8N6L1 136 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ZNF540Q8NDQ6 660 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 RMDN1Q96DB5 314 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 TMA7Q9Y2S6 64 aaKnown RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 MIA3Q5JRA6 1907 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 PAPPA2Q9BXP8 1791 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 MUSKO15146 869 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 S100BP04271 92 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 MYCLP1P12525 358 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 GGT1P19440 569 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 BEX3Q00994 111 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ATAD3BQ5T9A4 648 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 DEPDC1Q5TB30 811 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 PIK3R6Q5UE93 754 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 SPATC1Q76KD6 591 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ZFAND4Q86XD8 727 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 SYTL1Q8IYJ3 562 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 C10orf111Q8N326 155 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ASB2Q96Q27 587 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ASPSCR1Q9BZE9 553 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 TPK1Q9H3S4 243 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ACTL8Q9H568 366 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 C8orf4Q9NR00 106 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 DNAJB9Q9UBS3 223 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 NOX1Q9Y5S8 564 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 MROH6A6NGR9 719 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 KERAO60938 352 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 NDUFS3O75489 264 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ZNF682O95780 498 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 PEX11BO96011 259 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 MT-ND2P03891 347 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 UROSP10746 265 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 DBTP11182 482 aaKnown RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 SPNP16150 400 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ACVRL1P37023 503 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 DCTP40126 519 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 HK3P52790 923 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 PPP2R2BQ00005 443 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 RAD51Q06609 339 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 SOWAHCQ53LP3 525 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 LIMS2Q7Z4I7 341 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 MICU2Q8IYU8 434 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 FAM83FQ8NEG4 500 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 NSMCE3Q96MG7 304 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 AARSD1Q9BTE6 412 aaKnown RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 ZBTB20Q9HC78 741 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 SLC6A13Q9NSD5 602 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 TAS2R13Q9NYV9 303 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 RGS17Q9UGC6 210 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 PCTPQ9UKL6 214 aa12.72□□□□□ -0.37
COL8A1-202ENST00000273342 INTS6Q9UL03 887 aaKnown RBP12.72□□□□□ -0.37
COL8A1-202ENST00000273342 A0A1W2PQH9 124 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 SNAI1O95863 264 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms