RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 IL22Q9GZX6 179 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 IMP3Q9NV31 184 aaKnown RBP15.6■□□□□ 0.09
UBR3-201ENST00000272793 ANKRD34BA5PLL1 514 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 CD247P20963 164 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 TTPAP49638 278 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 CCDC58Q4VC31 144 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 KCNT2Q6UVM3 1135 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 ARCQ7LC44 396 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 GPR180Q86V85 440 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 LACRTQ9GZZ8 138 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 DNAJC28Q9NX36 388 aa15.6■□□□□ 0.09
UBR3-201ENST00000272793 TRAV6A0A075B6T7 132 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 K7EPK0 472 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 COX4I1P13073 169 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 TMEM11P17152 192 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 RETSATQ6NUM9 610 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 FAM71E2Q8N5Q1 922 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 CENPMQ9NSP4 180 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 PTPRTO14522 1441 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 EML1O00423 815 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 IDO1P14902 403 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 EPCAMP16422 314 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 FXYD6P3P58550 94 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 CD47Q08722 323 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 ERGIC2Q96RQ1 377 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 KCND2Q9NZV8 630 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 CNOT11Q9UKZ1 510 aaKnown RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 JUNP05412 331 aaKnown RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 BCKDHAP12694 445 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 F8A1P23610 371 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 IDH3GP51553 393 aaPredicted RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 PSMA6P60900 246 aaKnown RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 GPR158Q5T848 1215 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 FAM171A1Q5VUB5 890 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 RANBP3LQ86VV4 465 aaPredicted RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 SPATA6LQ8N4H0 392 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 ANKRA2Q9H9E1 313 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 TMEM100Q9NV29 134 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 MPDZO75970 2070 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 NUP214P35658 2090 aaPredicted RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 NME6O75414 186 aaPredicted RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 TRAPPC6AO75865 159 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 ECT2LQ008S8 904 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 POLR1EQ9GZS1 481 aaKnown RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 H7C417 338 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 TNFRSF11BO00300 401 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 PLD2O14939 933 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 SHBGP04278 402 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 YBX3P16989 372 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■■■□□ 16.5
UBR3-201ENST00000272793 ITPKAP23677 461 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 ODF4Q2M2E3 257 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 RALGPS2Q86X27 583 aaPredicted RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 SCUBE3Q8IX30 993 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 GTPBP2Q9BX10 602 aaKnown RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 FLRT2O43155 660 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 CD44P16070 742 aaKnown RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 MAB21L1Q13394 359 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 MAMLD1Q13495 774 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 HERC3Q15034 1050 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 CPNE2Q96FN4 548 aaPredicted RBP15.59■□□□□ 0.09
UBR3-201ENST00000272793 SYT4Q9H2B2 425 aa15.59■□□□□ 0.09
UBR3-201ENST00000272793 SLC3A1Q07837 685 aa15.58■□□□□ 0.09
UBR3-201ENST00000272793 ZNF616Q08AN1 781 aa15.58■□□□□ 0.09
UBR3-201ENST00000272793 TRIM28Q13263 835 aaKnown RBP15.58■□□□□ 0.09
UBR3-201ENST00000272793 SLC8B1Q6J4K2 584 aa15.58■□□□□ 0.09
UBR3-201ENST00000272793 COG8Q96MW5 612 aa15.58■□□□□ 0.09
UBR3-201ENST00000272793 PTBP2Q9UKA9 531 aaKnown RBP15.58■□□□□ 0.09
UBR3-201ENST00000272793 TSHRP16473 764 aa15.58■□□□□ 0.09
UBR3-201ENST00000272793 HABP2Q14520 560 aaPredicted RBP15.58■□□□□ 0.09
UBR3-201ENST00000272793 GET4Q7L5D6 327 aaPredicted RBP15.58■□□□□ 0.09
UBR3-201ENST00000272793 ZNF571Q7Z3V5 609 aaPredicted RBP15.58■□□□□ 0.09
UBR3-201ENST00000272793 HTR3CQ8WXA8 447 aa15.58■□□□□ 0.09
UBR3-201ENST00000272793 PARK7Q99497 189 aaKnown RBP15.58■□□□□ 0.09
UBR3-201ENST00000272793 ATP13A3Q9H7F0 1226 aa15.58■□□□□ 0.09
UBR3-201ENST00000272793 NINJ2Q9NZG7 142 aa15.58■□□□□ 0.09
UBR3-201ENST00000272793 ZNF223Q9UK11 482 aaPredicted RBP15.58■□□□□ 0.09
UBR3-201ENST00000272793 VDRP11473 427 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 ICAM3P32942 547 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 ZNF517Q6ZMY9 492 aaPredicted RBP15.58■□□□□ 0.08
UBR3-201ENST00000272793 HTATIP2Q9BUP3 242 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 LRMDAQ9H2I8 198 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 GMDSO60547 372 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 RPP14O95059 124 aaKnown RBP15.58■□□□□ 0.08
UBR3-201ENST00000272793 TRBC1P01850 177 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 APOA2P02652 100 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 ANXA3P12429 323 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 RBL1P28749 1068 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 TMEM176AQ96HP8 235 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 TCF12Q99081 682 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 C2orf49Q9BVC5 232 aaPredicted RBP15.58■□□□□ 0.08
UBR3-201ENST00000272793 DENND2DQ9H6A0 471 aaPredicted RBP15.58■□□□□ 0.08
UBR3-201ENST00000272793 SMURF2Q9HAU4 748 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 FBXO6Q9NRD1 293 aaPredicted RBP15.58■□□□□ 0.08
UBR3-201ENST00000272793 DNPEPQ9ULA0 475 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 IL7RP16871 459 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 CCNHP51946 323 aaPredicted RBP15.58■□□□□ 0.08
UBR3-201ENST00000272793 HTD2P86397 168 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 TIGD3Q6B0B8 471 aa15.58■□□□□ 0.08
UBR3-201ENST00000272793 PHYKPLQ8IUZ5 450 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms