RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 FAM159BA6NKW6 160 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 CCNYL3P0C7X3 344 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 ATP1B2P14415 290 aaPredicted RBP13.52□□□□□ -0.25
NPC1-201ENST00000269228 PSMA3P25788 255 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 RAB33AQ14088 237 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 RALGPS1Q5JS13 557 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 PRR23BQ6ZRT6 265 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 ARMCX6Q7L4S7 300 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 LRRTM4Q86VH4 590 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 HOPXQ9BPY8 73 aaPredicted RBP13.52□□□□□ -0.25
NPC1-201ENST00000269228 GRIP2Q9C0E4 1043 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 PCBD2Q9H0N5 130 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 LRMDAQ9H2I8 198 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 EXO5Q9H790 373 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 TPRKBQ9Y3C4 175 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 TEX264Q9Y6I9 313 aa13.52□□□□□ -0.25
NPC1-201ENST00000269228 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 K7EPI3 171 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 M0QZQ0 153 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 NPHS1O60500 1241 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 POP7O75817 140 aaKnown RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 SIX3O95343 332 aaPredicted RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 CYP11A1P05108 521 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 RBM20Q5T481 1227 aaKnown RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 PIK3R6Q5UE93 754 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 PIM3Q86V86 326 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 GSTCDQ8NEC7 633 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 ATP6V1HQ9UI12 483 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 SAMHD1Q9Y3Z3 626 aaKnown RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 NHSQ6T4R5 1651 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 CHRNGP07510 517 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 CTSAP10619 480 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 KCNA5P22460 613 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 GPX6P59796 221 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 DEFB103AP81534 67 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 RALGDSQ12967 914 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 PRKD1Q15139 912 aaPredicted RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 NEDD8Q15843 81 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 METTL21CQ5VZV1 264 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 ZC3HC1Q86WB0 502 aaKnown RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 PRSS58Q8IYP2 241 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 ADGRG2Q8IZP9 1017 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 LIX1Q8N485 282 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 FNDC11Q9BVV2 318 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 HEPACAM2A8MVW5 462 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 B4DGG1 531 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 SOCS7O14512 581 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 ALPPL2P10696 532 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 Q6ZVL8 140 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 ARMC8Q8IUR7 673 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 SLC9A6Q92581 669 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 ZNF184Q99676 751 aaPredicted RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 CCM2Q9BSQ5 444 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 MRPS30Q9NP92 439 aaKnown RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 LRCH1Q9Y2L9 728 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 CCDC189A1A4V9 331 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 DYTNA2CJ06 578 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 OR10H3O60404 316 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 ZNF8P17098 575 aaPredicted RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 RPL10P27635 214 aaKnown RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 SPIBQ01892 262 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 FOXM1Q08050 763 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 TCEAL1Q15170 157 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 RAB6CQ53S08 254 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
NPC1-201ENST00000269228 ANKRD46Q86W74 232 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 BTBD9Q96Q07 612 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 VPS35Q96QK1 796 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 P2RY13Q9BPV8 354 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 RAB6CQ9H0N0 254 aa13.51□□□□□ -0.25
NPC1-201ENST00000269228 LEFTY1O75610 366 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 MYL12AP19105 171 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 EFNA1P20827 205 aaPredicted RBP13.5□□□□□ -0.25
NPC1-201ENST00000269228 ITPKBP27987 946 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 VIPR2P41587 438 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 MTAPQ13126 283 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 LPCAT2Q7L5N7 544 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 CYP2U1Q7Z449 544 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 UMODL1-AS1Q8N2C9 162 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 OR52L1Q8NGH7 329 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 LENG8Q96PV6 779 aaPredicted RBP13.5□□□□□ -0.25
NPC1-201ENST00000269228 CDK15Q96Q40 435 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 EPS8L2Q9H6S3 715 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 ADGRE2Q9UHX3 823 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 STRCQ7RTU9 1775 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 HAS3O00219 553 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 CLDN4O14493 209 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 ECI2O75521 394 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 SMIM11AP58511 58 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 NTHL1P78549 312 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 LRRC32Q14392 662 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 DEFB119Q8N690 84 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 FAM46DQ8NEK8 389 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 SMARCD2Q92925 531 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 TSGA13Q96PP4 275 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 TBC1D23Q9NUY8 699 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 MYRFQ9Y2G1 1151 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 TMEM98Q9Y2Y6 226 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 MAP4K5Q9Y4K4 846 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms