RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PLPP4Q5VZY2 271 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 FSTL4Q6MZW2 842 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 PSRC1Q6PGN9 363 aaPredicted RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 CFAP206Q8IYR0 622 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 PIWIL1Q96J94 861 aaKnown RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 DPEP3Q9H4B8 488 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 SQORQ9Y6N5 450 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 CXCR6O00574 342 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 PRAMEF1O95521 474 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 RYKP34925 604 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 ATXN1P54253 815 aaKnown RBP17.77■□□□□ 0.44
COL5A3-201ENST00000264828 GHDCQ8N2G8 530 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 FIBCD1Q8N539 461 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 OR10H4Q8NGA5 316 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 PIGXQ8TBF5 258 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 STYXQ8WUJ0 223 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 PMEPA1Q969W9 287 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 ESAMQ96AP7 390 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 CCL16O15467 120 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 MSCO60682 206 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 MAPK12P53778 367 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 GFOD2Q3B7J2 385 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 HMCESQ96FZ2 354 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 CST11Q9H112 138 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 ZFP37Q9Y6Q3 630 aaPredicted RBP17.77■□□□□ 0.44
COL5A3-201ENST00000264828 MED1Q15648 1581 aaPredicted RBP17.77■□□□□ 0.44
COL5A3-201ENST00000264828 ZZZ3Q8IYH5 903 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 TAMM41Q96BW9 452 aa17.77■□□□□ 0.44
COL5A3-201ENST00000264828 CHP2O43745 196 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 FKTNO75072 461 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 NME6O75414 186 aaPredicted RBP17.77■□□□□ 0.43
COL5A3-201ENST00000264828 IFI30P13284 250 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 AP2S1P53680 142 aaPredicted RBP17.77■□□□□ 0.43
COL5A3-201ENST00000264828 RFTN2Q52LD8 501 aaPredicted RBP17.77■□□□□ 0.43
COL5A3-201ENST00000264828 MED27Q6P2C8 311 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 MIOSQ9NXC5 875 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 NOL4O94818 638 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 CXCL14O95715 111 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 LCP2Q13094 533 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 HGSNATQ68CP4 663 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 LCLAT1Q6UWP7 414 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 OR2L3Q8NG85 312 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 HEXDCQ8WVB3 486 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 TBX5Q99593 518 aa17.77■□□□□ 0.43
COL5A3-201ENST00000264828 EIF3KQ9UBQ5 218 aaKnown RBP17.77■□□□□ 0.43
COL5A3-201ENST00000264828 C5orf60A6NFR6 353 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 CILPO75339 1184 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 CLDN11O75508 207 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 MT-CYBP00156 380 aaPredicted RBP17.76■□□□□ 0.43
COL5A3-201ENST00000264828 ADH1CP00326 375 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 PSKH1P11801 424 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 PRDX6P30041 224 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 CRTC2Q53ET0 693 aaPredicted RBP17.76■□□□□ 0.43
COL5A3-201ENST00000264828 PEX5LQ8IYB4 626 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 ARMC10Q8N2F6 343 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 ZCCHC10Q8TBK6 192 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 SDCBP2Q9H190 292 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 OR51V1Q9H2C8 321 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 TUBA8Q9NY65 449 aaPredicted RBP17.76■□□□□ 0.43
COL5A3-201ENST00000264828 OR14I1A6ND48 311 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 GNRH1P01148 92 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 C4BPAP04003 597 aaKnown RBP17.76■□□□□ 0.43
COL5A3-201ENST00000264828 NRLP54845 237 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 CHADLQ6NUI6 762 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 ZDHHC21Q8IVQ6 265 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 BAZ2BQ9UIF8 2168 aaKnown RBP17.76■□□□□ 0.43
COL5A3-201ENST00000264828 PARP4Q9UKK3 1724 aaKnown RBP17.76■□□□□ 0.43
COL5A3-201ENST00000264828 S100A1P23297 94 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 SLC38A4Q969I6 547 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 A0A1W2PQ67 120 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 MAGEB17A8MXT2 336 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 OR1F1O43749 312 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 GPIP06744 558 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 GANABQ14697 944 aaKnown RBP17.76■□□□□ 0.43
COL5A3-201ENST00000264828 CNPY1Q3B7I2 92 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 C11orf65Q8NCR3 313 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 KCNN2Q9H2S1 579 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 PLEKHA1Q9HB21 404 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 TVP23BQ9NYZ1 205 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 FCF1Q9Y324 198 aaKnown RBP17.76■□□□□ 0.43
COL5A3-201ENST00000264828 PEX16Q9Y5Y5 336 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 ROBO3Q96MS0 1386 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 CDK14O94921 469 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 ADGRE1Q14246 886 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 SLC51AQ86UW1 340 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 SVOPLQ8N434 492 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 COMMD3Q9UBI1 195 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 SALL4Q9UJQ4 1053 aa17.76■□□□□ 0.43
COL5A3-201ENST00000264828 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
COL5A3-201ENST00000264828 FABP12A6NFH5 140 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 TULP3O75386 442 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 RPLP0P05388 317 aaKnown RBP17.75■□□□□ 0.43
COL5A3-201ENST00000264828 HOXB6P17509 224 aaKnown RBP17.75■□□□□ 0.43
COL5A3-201ENST00000264828 TACR2P21452 398 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 AP3S2P59780 193 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 IRF9Q00978 393 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 PCBP1Q15365 356 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL5A3-201ENST00000264828 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
COL5A3-201ENST00000264828 FTHL17Q9BXU8 183 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms