RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 LHX8Q68G74 356 aa16.06■□□□□ 0.16
CTCF-201ENST00000264010 GTF2H2CQ6P1K8 395 aa16.06■□□□□ 0.16
CTCF-201ENST00000264010 OSCP1Q8WVF1 389 aa16.06■□□□□ 0.16
CTCF-201ENST00000264010 GLMNQ92990 594 aa16.06■□□□□ 0.16
CTCF-201ENST00000264010 MAELQ96JY0 434 aaKnown RBP16.06■□□□□ 0.16
CTCF-201ENST00000264010 CLSTN3Q9BQT9 956 aa16.06■□□□□ 0.16
CTCF-201ENST00000264010 OSBPL11Q9BXB4 747 aa16.06■□□□□ 0.16
CTCF-201ENST00000264010 KLF16Q9BXK1 252 aaPredicted RBP16.06■□□□□ 0.16
CTCF-201ENST00000264010 DGCR6LQ9BY27 220 aa16.06■□□□□ 0.16
CTCF-201ENST00000264010 MAGEE1Q9HCI5 957 aa16.06■□□□□ 0.16
CTCF-201ENST00000264010 FFAR3O14843 346 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 GPR42O15529 346 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 COQ9O75208 318 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 TIPRLO75663 272 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 LDLRP01130 860 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 ERVK-8P63133 956 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 SEMA3AQ14563 771 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 MDGA1Q8NFP4 955 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 ZNF296Q8WUU4 475 aaPredicted RBP16.05■□□□□ 0.16
CTCF-201ENST00000264010 SLC39A3Q9BRY0 314 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 ABCB10Q9NRK6 738 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 KCTD5Q9NXV2 234 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 H3BSA7 217 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 SLC28A1O00337 649 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 HSPA7P48741 367 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 C6orf52Q5T4I8 152 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 LRTOMTQ8WZ04 291 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 SEPHS2Q99611 448 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 MCMBPQ9BTE3 642 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 KLKB1P03952 638 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 ENTPD1P49961 510 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 AGTR2P50052 363 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 AP5B1Q2VPB7 878 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 NADK2Q4G0N4 442 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 XKR5Q6UX68 686 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 TMEM151AQ8N4L1 468 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 SLC43A3Q8NBI5 491 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 FOPNLQ96NB1 174 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 DHRS7Q9Y394 339 aa16.05■□□□□ 0.16
CTCF-201ENST00000264010 ABHD14A-ACY1A0A1B0GW23 586 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 IQCF5A8MTL0 148 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 PGLSO95336 258 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 MAPK1P28482 360 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 HOXD12P35452 270 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 CLK1P49759 484 aaKnown RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 RPL38P63173 70 aaKnown RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 ECT2LQ008S8 904 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 HSPA14Q0VDF9 509 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 RAB33AQ14088 237 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 BOP1Q14137 746 aaKnown RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 GRB7Q14451 532 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 ZNF284Q2VY69 593 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 GPR33Q49SQ1 333 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 HACD2Q6Y1H2 254 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 DDX53Q86TM3 631 aaKnown RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 SPPL2CQ8IUH8 684 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 FAM162AQ96A26 154 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 MYEOVQ96EZ4 313 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 ATOH8Q96SQ7 321 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 MUC13Q9H3R2 512 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 PDFQ9HBH1 243 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 OAS3Q9Y6K5 1087 aaKnown RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 FFAR2O15552 330 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 CYP2A6P11509 494 aaPredicted RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 ZNF23P17027 643 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 ZNF24P17028 368 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 CYP2A7P20853 494 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 NR1H2P55055 460 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 MS4A2Q01362 244 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 TGFBIQ15582 683 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 TMEM207Q6UWW9 146 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 CLEC4FQ8N1N0 589 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 PRICKLE1Q96MT3 831 aaPredicted RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 RNF38Q9H0F5 515 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 MYRFQ9Y2G1 1151 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 PSMD11O00231 422 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 UGT1A6P19224 532 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 UGT1A1P22309 533 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 UGT1A4P22310 534 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 UGT1A3P35503 534 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 UGT1A5P35504 534 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 CDKN1CP49918 316 aaPredicted RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 OGFRL1Q5TC84 451 aaPredicted RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 LARP4Q71RC2 724 aaKnown RBP eCLIP16.04■□□□□ 0.16
CTCF-201ENST00000264010 MCOLN3Q8TDD5 553 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 FUBP1Q96AE4 644 aaKnown RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 RPL10LQ96L21 214 aaKnown RBP16.04■□□□□ 0.16
CTCF-201ENST00000264010 TRPV5Q9NQA5 729 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 HSFX1Q9UBD0 423 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 TTC3P53804 2025 aa16.04■□□□□ 0.16
CTCF-201ENST00000264010 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.03■□□□□ 0.16
CTCF-201ENST00000264010 CCRL2O00421 344 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 GRM6O15303 877 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 DNAJA2O60884 412 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 CNPP09543 421 aaKnown RBP16.03■□□□□ 0.16
CTCF-201ENST00000264010 KCNC1P48547 511 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 KANK2Q63ZY3 851 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 PIANPQ8IYJ0 282 aa16.03■□□□□ 0.16
CTCF-201ENST00000264010 LRRC58Q96CX6 371 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms