RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 TOP6BLQ8N6T0 577 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 ZNF548Q8NEK5 533 aaPredicted RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 OR2L8Q8NGY9 312 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 ZFP3Q96NJ6 502 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 SLC38A3Q99624 504 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 IFT27Q9BW83 186 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 SCGB1D2O95969 90 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 SLC35G6P0C7Q6 338 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 LAPTM4BQ86VI4 370 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 BRSK1Q8TDC3 778 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 MIOSQ9NXC5 875 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 SIRPGQ9P1W8 387 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 ZFP37Q9Y6Q3 630 aaPredicted RBP14.11□□□□□ -0.15
CUX2-201ENST00000261726 STK16O75716 305 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 GLUD2P49448 558 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 OGFOD2Q6N063 350 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 PIWIL1Q96J94 861 aaKnown RBP14.11□□□□□ -0.15
CUX2-201ENST00000261726 BTN2A3PQ96KV6 586 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 UCKL1Q9NWZ5 548 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 EIF3KQ9UBQ5 218 aaKnown RBP14.11□□□□□ -0.15
CUX2-201ENST00000261726 CDH22Q9UJ99 828 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 MFSD11O43934 449 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 INMTO95050 263 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 PRAMEF1O95521 474 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 PLGP00747 810 aaPredicted RBP14.11□□□□□ -0.15
CUX2-201ENST00000261726 ITGB1P05556 798 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 FSHRP23945 695 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 DSC2Q02487 901 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 ELP6Q0PNE2 266 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 SHC3Q92529 594 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 B3GALT6Q96L58 329 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 DEFB118Q96PH6 123 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 SLC6A15Q9H2J7 730 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 PRKCIP41743 596 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 XIAPP98170 497 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 LAPTM5Q13571 262 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 SLC9B1Q4ZJI4 515 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 C11orf65Q8NCR3 313 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 OR6K6Q8NGW6 343 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 RFKQ969G6 155 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 POP5Q969H6 163 aaKnown RBP14.11□□□□□ -0.15
CUX2-201ENST00000261726 CTPS2Q9NRF8 586 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 OR6C75A6NL08 312 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 FGF19O95750 216 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 MAP2K5Q13163 448 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 APOBEC3HQ6NTF7 200 aaKnown RBP14.11□□□□□ -0.15
CUX2-201ENST00000261726 LPGAT1Q92604 370 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 KLK6Q92876 244 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 ZSWIM3Q96MP5 696 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 CHRAC1Q9NRG0 131 aa14.11□□□□□ -0.15
CUX2-201ENST00000261726 PER2O15055 1255 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 TULP3O75386 442 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 CCKBRP32239 447 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 MAGEA12P43365 314 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 PARP15Q460N3 678 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 RIPOR3Q96MK2 946 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 FEM1AQ9BSK4 669 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 SAP18O00422 153 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 AIREO43918 545 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 BPNT1O95861 308 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 C2P06681 752 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 LINGO3P0C6S8 592 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 UBXN11Q5T124 520 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 COX18Q8N8Q8 333 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 SIDT2Q8NBJ9 832 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 NAXEQ8NCW5 288 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 SMG7Q92540 1137 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 SLC25A36Q96CQ1 311 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 HIPK3Q9H422 1215 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 SYNPO2Q9UMS6 1093 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 FCF1Q9Y324 198 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 CCNE2O96020 404 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 ZNF20P17024 532 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 PRR5P85299 388 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 UGCGQ16739 394 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 TOR1AIP1Q5JTV8 583 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 VSIG10LQ86VR7 867 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 SLC33A1O00400 549 aaPredicted RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 TLX3O43711 291 aaPredicted RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 ATF4P18848 351 aaPredicted RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 ACVR2AP27037 513 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 CRHR1P34998 444 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 RASGEF1BQ0VAM2 473 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 DNASE1L3Q13609 305 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 SGCBQ16585 318 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 CRTC2Q53ET0 693 aaPredicted RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 IQCHQ86VS3 1027 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 DUS2Q9NX74 493 aaKnown RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 IFT80Q9P2H3 777 aaPredicted RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 NR2E1Q9Y466 385 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 COL5A2P05997 1499 aaPredicted RBP14.1□□□□□ -0.15
CUX2-201ENST00000261726 A0A1W2PQ67 120 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 HYKKA2RU49 373 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 L7N2F9 121 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 FKTNO75072 461 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 GRM5P41594 1212 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 OR3A3P47888 321 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 OR3A2P47893 321 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 VAMP2P63027 116 aa14.1□□□□□ -0.15
CUX2-201ENST00000261726 ROR2Q01974 943 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms