RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ABCG8Q9H221 673 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 PFDN4Q9NQP4 134 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 INTS10Q9NVR2 710 aaKnown RBP14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 AASSQ9UDR5 926 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 ZNHIT2Q9UHR6 403 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 PCTPQ9UKL6 214 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 NYNRINQ9P2P1 1898 aaKnown RBP14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 XYLBO75191 536 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 WISP3O95389 354 aaPredicted RBP14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 CST1P01037 141 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 PKMP14618 531 aaKnown RBP14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 RPL38P63173 70 aaKnown RBP14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 HMGCS1Q01581 520 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 RFTN2Q52LD8 501 aaPredicted RBP14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 FAM98BQ52LJ0 330 aaKnown RBP14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 SETMARQ53H47 684 aaPredicted RBP14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 ENPP6Q6UWR7 440 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 Q6ZSR9 355 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 TBC1D15Q8TC07 691 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 BADQ92934 168 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 ITFG2Q969R8 447 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 NRBF2Q96F24 287 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 DERL2Q9GZP9 239 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 FBXO44Q9H4M3 255 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 CERS4Q9HA82 394 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 HACD3Q9P035 362 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 MED16Q9Y2X0 877 aa14.27□□□□□ -0.13
SFSWAP-201ENST00000261674 TCRBV5S2A0A599 114 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 HS6ST1O60243 411 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 GSNP06396 782 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 THRBP10828 461 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 ALDH4A1P30038 563 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 PERM1Q5SV97 790 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 GCNT7Q6ZNI0 430 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 SLC15A4Q8N697 577 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 TOR3AQ9H497 397 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 CXXC1Q9P0U4 656 aaPredicted RBP14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 CCDC85CA6NKD9 419 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 F5H5T6 163 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 M0QZQ0 153 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 VPS4BO75351 444 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 CYP11A1P05108 521 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 IRF1P10914 325 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 HSPA7P48741 367 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 FOXD4Q12950 439 aaPredicted RBP14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 NFATC3Q12968 1075 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 PIWIL3Q7Z3Z3 882 aaKnown RBP14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 SNX29P2Q8IUI4 249 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 PHACTR4Q8IZ21 702 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 ALDH16A1Q8IZ83 802 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 SNX19Q92543 992 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 BORCS5Q969J3 196 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 FAM162AQ96A26 154 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 CGREF1Q99674 301 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 LHPPQ9H008 270 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 ADGRE2Q9UHX3 823 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 PCDHGA11Q9Y5H2 935 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 CORINQ9Y5Q5 1042 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 G3V2T6 193 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 TLR5O60602 858 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 CAPN15O75808 1086 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 MLYCDO95822 493 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 ANXA6P08133 673 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 CTPS1P17812 591 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 NKX3-2P78367 333 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 ANKRD26P1Q6NSI1 321 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 CYP20A1Q6UW02 462 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 OR6K2Q8NGY2 324 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 AURKBQ96GD4 344 aaPredicted RBP14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 NSMCE3Q96MG7 304 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 SLC52A3Q9NQ40 469 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 FAIMQ9NVQ4 179 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 SCML2Q9UQR0 700 aa14.26□□□□□ -0.13
SFSWAP-201ENST00000261674 H0Y626 953 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 K7EPI3 171 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 EEDO75530 441 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 TRIM16O95361 564 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 AGXTP21549 392 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 EEFSECP57772 596 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 DAG1Q14118 895 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 TGFBIQ15582 683 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 ZNF829Q3KNS6 432 aaPredicted RBP14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 BROXQ5VW32 411 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 ZNF598Q86UK7 904 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 C8orf59Q8N0T1 100 aaPredicted RBP14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 NKAPQ8N5F7 415 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 OR2T12Q8NG77 320 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 ACDQ96AP0 544 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 SCUBE2Q9NQ36 999 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 VAPAQ9P0L0 249 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 AFF4Q9UHB7 1163 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 COQ6Q9Y2Z9 468 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 PCDHB5Q9Y5E4 795 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 FAM234BA2RU67 622 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 PRAMEF11O60813 436 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 OGNP20774 298 aaKnown RBP14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 TACR2P21452 398 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 HLCSP50747 726 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 FAM174BQ3ZCQ3 159 aa14.25□□□□□ -0.13
SFSWAP-201ENST00000261674 GALNT5Q7Z7M9 940 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms