RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CYP11A1P05108 521 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 GNAZP19086 355 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 CYP3A5P20815 502 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ITPKAP23677 461 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 TGM3Q08188 693 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 ACOX1Q15067 660 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 FAM151BQ6UXP7 276 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 LINGO2Q7L985 606 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 LIX1Q8N485 282 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 PIWIL1Q96J94 861 aaKnown RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 PAQR5Q9NXK6 330 aaPredicted RBP9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 FETUBQ9UGM5 382 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 GIT1Q9Y2X7 761 aa9.63□□□□□ -0.87
CTDSPL2-201ENST00000260327 OR4F21O95013 312 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 OXSR1O95747 527 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 MNDAP41218 407 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CASP9P55211 416 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 RPS3AP61247 264 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CYP2A13Q16696 494 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ARHGAP15Q53QZ3 475 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 NUDT18Q6ZVK8 323 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 AMIGO1Q86WK6 493 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CDCA5Q96FF9 252 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZNF285Q96NJ3 590 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PHOX2BQ99453 314 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 GAL3ST1Q99999 423 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 POLR2J2Q9GZM3 115 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CHMP1AQ9HD42 196 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 COQ4Q9Y3A0 265 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SH3PXD2BA1X283 911 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 HTRA2O43464 458 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ERAL1O75616 437 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 APOL3O95236 402 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SMIM10L2AP0DMW4 78 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SMIM10L2BP0DMW5 78 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CES1P23141 567 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ARL2P36404 184 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 GRM5P41594 1212 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 UGT8Q16880 541 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 POM121L1PQ3SYA9 428 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CPTPQ5TA50 214 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 GARNL3Q5VVW2 1013 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CDCA2Q69YH5 1023 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 RPTNQ6XPR3 784 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 TREML1Q86YW5 311 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ADARB2Q9NS39 739 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SEMA3GQ9NS98 782 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 BCL9LQ86UU0 1499 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SPATA31A6Q5VVP1 1343 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SCELO95171 688 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 LPOP22079 712 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PTPN3P26045 913 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 KIR3DL1P43629 444 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CCR10P46092 362 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 HNMTP50135 292 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PLD1Q13393 1074 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 TAF13Q15543 124 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 UAP1L1Q3KQV9 507 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CACUL1Q86Y37 369 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 OR6K2Q8NGY2 324 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 TRIM43Q96BQ3 446 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 HEPHQ9BQS7 1158 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ZDHHC6Q9H6R6 413 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PRDM8Q9NQV8 689 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 C14orf119Q9NWQ9 140 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PIK3C2AO00443 1686 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SMAD9O15198 467 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 IGSF6O95976 241 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PRKACGP22612 351 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 TM4SF1P30408 202 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 EPHB3P54753 998 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PFKPQ01813 784 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 USP45Q70EL2 814 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SLC51AQ86UW1 340 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 TRAPPC5Q8IUR0 188 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 LRRC52Q8N7C0 313 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 OR10Q1Q8NGQ4 319 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ITPAQ9BY32 194 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 TIGARQ9NQ88 270 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 EMC3Q9P0I2 261 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 IGKV6D-41A0A0C4DH26 115 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 IQCF5A8MTL0 148 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 IRF6O14896 467 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CHST10O43529 356 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 DNTTP04053 509 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PABPC4LP0CB38 370 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 AOC1P19801 751 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 ATP5C1P36542 298 aaKnown RBP9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 RHDQ02161 417 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SMCO1Q147U7 214 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 OR4K2Q8NGD2 314 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 PPCDCQ96CD2 204 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 EBPLQ9BY08 206 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 MED11Q9P086 117 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 AASSQ9UDR5 926 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 NCKAP1Q9Y2A7 1128 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 MAU2Q9Y6X3 613 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 CAMTA1Q9Y6Y1 1673 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 SERPINB7O75635 380 aa9.62□□□□□ -0.87
CTDSPL2-201ENST00000260327 HOXD12P35452 270 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms