RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 RPS17P08708 135 aaKnown RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 SPNP16150 400 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 FMO3P31513 532 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 LAPTM5Q13571 262 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 NKG7Q16617 165 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 PLA2G4EQ3MJ16 856 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 C6orf136Q5SQH8 315 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 ANKRD34AQ69YU3 496 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 ZNF544Q6NX49 715 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 SLC27A1Q6PCB7 646 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 ALKAL1Q6UXT8 129 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 LRRC8DQ7L1W4 858 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 GET4Q7L5D6 327 aaPredicted RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 LDB1Q86U70 411 aaPredicted RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 FAM126BQ8IXS8 530 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 ZNF540Q8NDQ6 660 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 RASSF5Q8WWW0 418 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 KIAA1191Q96A73 305 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 CDK5RAP1Q96SZ6 601 aaKnown RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 ANGPTL3Q9Y5C1 460 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 MROH6A6NGR9 719 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 FADS2O95864 444 aaKnown RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 GOT2P00505 430 aaKnown RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 MT-ND2P03891 347 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 PRKACGP22612 351 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 S100A5P33763 92 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 FPGSQ05932 587 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 SMUG1Q53HV7 270 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 NOMO2Q5JPE7 1267 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 CAPN13Q6MZZ7 669 aaPredicted RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 KDELC1Q6UW63 502 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 OSTM1Q86WC4 334 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 METTL4Q8N3J2 472 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 TOP6BLQ8N6T0 577 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 AMER2Q8N7J2 671 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 ZNF548Q8NEK5 533 aaPredicted RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 IL17RDQ8NFM7 739 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 OR2T11Q8NH01 316 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 SH3RF2Q8TEC5 729 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 RPL3LQ92901 407 aaKnown RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 RNF34Q969K3 372 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 FAM162AQ96A26 154 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 SLC10A4Q96EP9 437 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 GAD1Q99259 594 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 APOL4Q9BPW4 351 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 SLC25A51Q9H1U9 297 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 ATP13A1Q9HD20 1204 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 PNMA8BQ9ULN7 279 aaPredicted RBP11.34□□□□□ -0.59
TROAP-201ENST00000257909 RNF112Q9ULX5 631 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 PCDHB14Q9Y5E9 798 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 SPO11Q9Y5K1 396 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 N6AMT1Q9Y5N5 214 aa11.34□□□□□ -0.59
TROAP-201ENST00000257909 PDZK1P1A8MUH7 402 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 EIF3FO00303 357 aaPredicted RBP11.33□□□□□ -0.6
TROAP-201ENST00000257909 FGF10O15520 208 aaPredicted RBP11.33□□□□□ -0.6
TROAP-201ENST00000257909 ALX3O95076 343 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 MED26O95402 600 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 SLC2A3P11169 496 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 IGFBP5P24593 272 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 TGFBR2P37173 567 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 FAM209AQ5JX71 171 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 TPRG1LQ5T0D9 272 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 CES5AQ6NT32 575 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 SYVN1Q86TM6 617 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 MICU2Q8IYU8 434 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 PNPLA1Q8N8W4 532 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 FAM83FQ8NEG4 500 aaPredicted RBP11.33□□□□□ -0.6
TROAP-201ENST00000257909 OR6F1Q8NGZ6 308 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 COPS5Q92905 334 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 SLC38A4Q969I6 547 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 RHBDF1Q96CC6 855 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 C1QTNF3Q9BXJ4 246 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 SLC39A8Q9C0K1 460 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 C6orf62Q9GZU0 229 aaPredicted RBP11.33□□□□□ -0.6
TROAP-201ENST00000257909 CATSPERBQ9H7T0 1116 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 SYTL2Q9HCH5 934 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 HEBP1Q9NRV9 189 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 MARCH4Q9P2E8 410 aaPredicted RBP11.33□□□□□ -0.6
TROAP-201ENST00000257909 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 NUDT5Q9UKK9 219 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 CDH9Q9ULB4 789 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 PCDHGA3Q9Y5H0 932 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 PDCD11Q14690 1871 aaKnown RBP11.33□□□□□ -0.6
TROAP-201ENST00000257909 COL1A2P08123 1366 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 ELOVL7A1L3X0 281 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 OR2A25A4D2G3 310 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 SOCS7O14512 581 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 STX16O14662 325 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 SNX4O95219 450 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 RETP07949 1114 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 USP17L7P0C7H9 530 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 DPEP1P16444 411 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 HTR7P34969 479 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 TIAL1Q01085 375 aaKnown RBP eCLIP11.33□□□□□ -0.6
TROAP-201ENST00000257909 UBE2UQ5VVX9 321 aa11.33□□□□□ -0.6
TROAP-201ENST00000257909 ZNF549Q6P9A3 640 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 476.1 ms