RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SYNCRIPO60506 623 aaKnown RBP14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 SNRPB2P08579 225 aaKnown RBP14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 HMGCS1Q01581 520 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 DDX39BQ13838 428 aaKnown RBP14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 NR6A1Q15406 480 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 C5orf22Q49AR2 442 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 TIGD2Q4W5G0 525 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 TMEM259Q4ZIN3 620 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 INO80DQ53TQ3 878 aaPredicted RBP14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 ARSIQ5FYB1 569 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 PIGGQ5H8A4 983 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 CYHR1Q6ZMK1 362 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 CHST15Q7LFX5 561 aaPredicted RBP14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 NKAPQ8N5F7 415 aaKnown RBP14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 COQ10BQ9H8M1 238 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 POLG2Q9UHN1 485 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 SLC25A13Q9UJS0 675 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 INSL6Q9Y581 213 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 COL4A6Q14031 1691 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 C7orf72A4D263 438 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 CHEK2O96017 543 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 ME2P23368 584 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 GJA8P48165 433 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 ACVR1Q04771 509 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 MESP2Q0VG99 397 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 LCP2Q13094 533 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 TYSND1Q2T9J0 566 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 SERPINA13PQ6UXR4 307 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 Q6ZVL8 140 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 TMC8Q8IU68 726 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 HMGCLL1Q8TB92 370 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 GAB3Q8WWW8 586 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 ULK4Q96C45 1275 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 TEX37Q96LM6 180 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 ATG10Q9H0Y0 220 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.42□□□□□ -0.16e-6■■□□□ 13.7
TRAFD1-201ENST00000257604 B4GALT6Q9UBX8 382 aa14.42□□□□□ -0.1
TRAFD1-201ENST00000257604 PRR23AA6NEV1 266 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 SYCE1LA8MT33 242 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 WASH3PC4AMC7 463 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 AP1G1O43747 822 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 HMOX2P30519 316 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 C16orf72Q14CZ0 275 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 AARS2Q5JTZ9 985 aaKnown RBP14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 C6orf10Q5SRN2 563 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 CRTC1Q6UUV9 634 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 GFM2Q969S9 779 aaKnown RBP14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 SUV39H2Q9H5I1 410 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 TFB2MQ9H5Q4 396 aaKnown RBP14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 BRD9Q9H8M2 597 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 IPPKQ9H8X2 491 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 FARSBQ9NSD9 589 aaKnown RBP14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 KLQ9UEF7 1012 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 DMTF1Q9Y222 760 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 COQ6Q9Y2Z9 468 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 FBP2O00757 339 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 WASP42768 502 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 PTGER3P43115 390 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 UFM1P61960 85 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 ACBD5Q5T8D3 534 aaPredicted RBP14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 C22orf39Q6P5X5 142 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 GPR150Q8NGU9 434 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 ITFG1Q8TB96 612 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 SLC29A1Q99808 456 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 TMEM79Q9BSE2 394 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 DERL2Q9GZP9 239 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 SOX17Q9H6I2 414 aaPredicted RBP14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 SLAMF8Q9P0V8 285 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 RAB26Q9ULW5 256 aa14.41□□□□□ -0.1
TRAFD1-201ENST00000257604 PDLIM1O00151 329 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 NRP2O60462 931 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 PABPC1P11940 636 aaKnown RBP14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 CDH2P19022 906 aaPredicted RBP14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 LHCGRP22888 699 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 AP1S1P61966 158 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 TNK2Q07912 1038 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 STX5Q13190 355 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 MTA1Q13330 715 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 KRT80Q6KB66 452 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 Q6ZNB5 142 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 GPRIN3Q6ZVF9 776 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 TSPAN14Q8NG11 270 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 ACDQ96AP0 544 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 EPS15L1Q9UBC2 864 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 CHD5Q8TDI0 1954 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 ZNF839A8K0R7 811 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 TIPRLO75663 272 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 NCK1P16333 377 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 ITPKAP23677 461 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 ETV3P41162 512 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 PPP3CCP48454 512 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 NEK2P51955 445 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 METAP1P53582 386 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 LETMD1Q6P1Q0 360 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 SLC22A15Q8IZD6 547 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 TMEM74Q96NL1 305 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 IL23AQ9NPF7 189 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 ARL15Q9NXU5 204 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 CACNA2D2Q9NY47 1150 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 ZNF225Q9UK10 706 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms