RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 POU5F2Q8N7G0 328 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 RASGEF1AQ8N9B8 481 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 GAS2L1Q99501 681 aaPredicted RBP18.57■□□□□ 0.56
TRIM47-201ENST00000254816 MID1IP1Q9NPA3 183 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 CNOT6Q9ULM6 557 aaKnown RBP18.57■□□□□ 0.56
TRIM47-201ENST00000254816 A0A1W2PP55 124 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 CDK14O94921 469 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 NCF2P19878 526 aaPredicted RBP18.57■□□□□ 0.56
TRIM47-201ENST00000254816 TAS2R38P59533 333 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 AGBL4Q5VU57 503 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 CYP2U1Q7Z449 544 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 SLC44A3Q8N4M1 653 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 HDDC3Q8N4P3 179 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 LRCH3Q96II8 777 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 FAM126AQ9BYI3 521 aaPredicted RBP18.57■□□□□ 0.56
TRIM47-201ENST00000254816 MMADHCQ9H3L0 296 aaPredicted RBP18.57■□□□□ 0.56
TRIM47-201ENST00000254816 TCF7L2Q9NQB0 619 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 VTI1BQ9UEU0 232 aa18.57■□□□□ 0.56
TRIM47-201ENST00000254816 EIF2B4Q9UI10 523 aaKnown RBP18.57■□□□□ 0.56
TRIM47-201ENST00000254816 TMEM202A6NGA9 273 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 MBTPS2O43462 519 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 RNASEH1O60930 286 aaKnown RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 RPS17P08708 135 aaKnown RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 GPR1P46091 355 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 COPAP53621 1224 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 CLCQ05315 142 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 GALNT1Q10472 559 aaPredicted RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 TMEM115Q12893 351 aaPredicted RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 NUMA1Q14980 2115 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 LDLRAP1Q5SW96 308 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 ANKS6Q68DC2 871 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 RAVER1Q8IY67 606 aaKnown RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 ELMO1Q92556 727 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 THTPAQ9BU02 230 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 TRMOQ9BU70 441 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 MKRN2Q9H000 416 aaKnown RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 NUDT4Q9NZJ9 180 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 G3BP2Q9UN86 482 aaKnown RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 TMEM265A0A087WTH1 108 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 SLCO1B7G3V0H7 640 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 STX16-NPEPL1H3BU86 382 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 STX16O14662 325 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 FFAR2O15552 330 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 ADAM23O75077 832 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 LMNAP02545 664 aaKnown RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 NTSR1P30989 418 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 HK2P52789 917 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 FOXA1P55317 472 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 BTKQ06187 659 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 SKIV2LQ15477 1246 aaKnown RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 CCDC6Q16204 474 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 LSM12Q3MHD2 195 aaKnown RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 IL17RCQ8NAC3 791 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 SKA2Q8WVK7 121 aaPredicted RBP18.56■□□□□ 0.56
TRIM47-201ENST00000254816 KCNA7Q96RP8 456 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 ZBTB26Q9HCK0 441 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 TRAF6Q9Y4K3 522 aa18.56■□□□□ 0.56
TRIM47-201ENST00000254816 ZFC3H1O60293 1989 aaKnown RBP18.55■□□□□ 0.56
TRIM47-201ENST00000254816 NARSO43776 548 aaKnown RBP18.55■□□□□ 0.56
TRIM47-201ENST00000254816 RNASEH2AO75792 299 aaKnown RBP18.55■□□□□ 0.56
TRIM47-201ENST00000254816 SNUPNO95149 360 aaKnown RBP18.55■□□□□ 0.56
TRIM47-201ENST00000254816 PSMG1O95456 288 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 AOC1P19801 751 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 COL9A1P20849 921 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 RPS14P62263 151 aaKnown RBP18.55■□□□□ 0.56
TRIM47-201ENST00000254816 NAA25Q14CX7 972 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 TBCCQ15814 346 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 NXNQ6DKJ4 435 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 MBOAT1Q6ZNC8 495 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 PHYKPLQ8IUZ5 450 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.55■□□□□ 0.562e-9■■■■□ 25.8
TRIM47-201ENST00000254816 ARHGAP24Q8N264 748 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 PLA2G15Q8NCC3 412 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 RAB7BQ96AH8 199 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 PCTPQ9UKL6 214 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 CDYLQ9Y232 598 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 OARD1Q9Y530 152 aa18.55■□□□□ 0.56
TRIM47-201ENST00000254816 IGLON5A6NGN9 336 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 RAD51BO15315 384 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 TSPAN6O43657 245 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 PCDH8O95206 1070 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 KLF8O95600 359 aaPredicted RBP18.54■□□□□ 0.56
TRIM47-201ENST00000254816 PRDX3P30048 256 aaKnown RBP18.54■□□□□ 0.56
TRIM47-201ENST00000254816 CREB5Q02930 508 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 SCUBE1Q8IWY4 988 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 ULK2Q8IYT8 1036 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 STMN2Q93045 179 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 UBE2ZQ9H832 354 aaPredicted RBP18.54■□□□□ 0.56
TRIM47-201ENST00000254816 EIF4E1BA6NMX2 242 aaKnown RBP18.54■□□□□ 0.56
TRIM47-201ENST00000254816 AP2A2O94973 939 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 ADH1BP00325 375 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 C5AR1P21730 350 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 PBLDP30039 288 aaPredicted RBP18.54■□□□□ 0.56
TRIM47-201ENST00000254816 RAP1GDS1P52306 607 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 SLC25A3Q00325 362 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 TMEM220Q6QAJ8 160 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 LILRA3Q8N6C8 439 aaPredicted RBP18.54■□□□□ 0.56
TRIM47-201ENST00000254816 ZNF483Q8TF39 744 aaPredicted RBP18.54■□□□□ 0.56
TRIM47-201ENST00000254816 EGFL8Q99944 293 aa18.54■□□□□ 0.56
TRIM47-201ENST00000254816 E2F3O00716 465 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms