RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 HGH1Q9BTY7 390 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CHID1Q9BWS9 393 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TTLL2Q9BWV7 592 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SIK2Q9H0K1 926 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 RPF2Q9H7B2 306 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CAB39LQ9H9S4 337 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 GRIP1Q9Y3R0 1128 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 PCDHB1Q9Y5F3 818 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 EI24O14681 340 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SNPHO15079 494 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 IDH3BO43837 385 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 KERAO60938 352 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 DUSP11O75319 330 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SLC10A3P09131 477 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ALDH9A1P49189 494 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ARPC4P59998 168 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MS4A2Q01362 244 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 VAC14Q08AM6 782 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 PWP1Q13610 501 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 DPY19L1Q2PZI1 675 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 XKR7Q5GH72 579 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 PPM1LQ5SGD2 360 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 OTUD3Q5T2D3 398 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 METTL2BQ6P1Q9 378 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TFAP2DQ7Z6R9 452 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 DNAJB7Q7Z6W7 309 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 GPSM1Q86YR5 675 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TCAIMQ8N3R3 496 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF599Q96NL3 588 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SEPHS2Q99611 448 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 FEM1AQ9BSK4 669 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CRISPLD1Q9H336 500 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ALG9Q9H6U8 611 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CHRAC1Q9NRG0 131 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 FAM105AQ9NUU6 356 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 OAZ3Q9UMX2 235 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 BTBD3Q9Y2F9 522 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 BCKDKO14874 412 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 MUSKO15146 869 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 ERN1O75460 977 aaKnown RBP4.09□□□□□ -1.76
UBE4A-201ENST00000252108 EPOP01588 193 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 ITGA2P17301 1181 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 TPH1P17752 444 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 ACVR2AP27037 513 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 RPL3P39023 403 aaKnown RBP4.09□□□□□ -1.76
UBE4A-201ENST00000252108 HALP42357 657 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 GSK3BP49841 420 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 WNT3AP56704 352 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 RALGDSQ12967 914 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 CAPRIN1Q14444 709 aaKnown RBP4.09□□□□□ -1.76
UBE4A-201ENST00000252108 SEMA3AQ14563 771 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 PLA2G4EQ3MJ16 856 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 ZC3H12BQ5HYM0 836 aaKnown RBP4.09□□□□□ -1.76
UBE4A-201ENST00000252108 CLLU1OSQ5K130 101 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 NADSYN1Q6IA69 706 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 PAOXQ6QHF9 649 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 RSPO2Q6UXX9 243 aaPredicted RBP4.09□□□□□ -1.76
UBE4A-201ENST00000252108 MSANTD1Q6ZTZ1 278 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 LACC1Q8IV20 430 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 RGL4Q8IZJ4 473 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 TXNDC5Q8NBS9 432 aaKnown RBP4.09□□□□□ -1.76
UBE4A-201ENST00000252108 PAPD5Q8NDF8 572 aaKnown RBP4.09□□□□□ -1.76
UBE4A-201ENST00000252108 TRIB2Q92519 343 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 ITCHQ96J02 903 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 OMDQ99983 421 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 APOL2Q9BQE5 337 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 EXO5Q9H790 373 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 REEP1Q9H902 201 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 TMEM248Q9NWD8 314 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 ADPRHL2Q9NX46 363 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 GMPPBQ9Y5P6 360 aa4.09□□□□□ -1.76
UBE4A-201ENST00000252108 A0A1B0GTL3 188 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 A0A1B0GW55 424 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ELOVL7A1L3X0 281 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SOBPA7XYQ1 873 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 AGAP14A8MT82 685 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 H3BMQ9 156 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ANKRD28O15084 1053 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FZD6O60353 706 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 UGT2B4P06133 528 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HMBSP08397 361 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DUX4L2P0CJ85 424 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DUX4L3P0CJ86 424 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DUX4L4P0CJ87 422 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DUX4L5P0CJ88 424 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DUX4L6P0CJ89 424 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DUX4L7P0CJ90 424 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PRPS2P11908 318 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HNRNPLP14866 589 aaKnown RBP eCLIP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 RHOQP17081 205 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FDXRP22570 491 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HOXD9P28356 352 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 MTHFRP42898 656 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 CCR10P46092 362 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ARSFP54793 590 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 CTBSQ01459 385 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 GSTM4Q03013 218 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 CLCQ05315 142 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FCHO2Q0JRZ9 810 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms