RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 C16orf96A6NNT2 1141 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 RPP40O75818 363 aaKnown RBP18.67■□□□□ 0.58
SNX4-201ENST00000251775 ALOX5P09917 674 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 SLC6A4P31645 630 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 DUSP4Q13115 394 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 PHKG1Q16816 387 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 MEP1AQ16819 746 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 INAVAQ3KP66 663 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 C6orf141Q5SZD1 244 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 ANKRD13BQ86YJ7 626 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 GPR150Q8NGU9 434 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 VMP1Q96GC9 406 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 TMEM161AQ9NX61 479 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 PDE10AQ9Y233 779 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 ANKRD36A6QL64 1941 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 HOXD9P28356 352 aaPredicted RBP18.67■□□□□ 0.58
SNX4-201ENST00000251775 CASP2P42575 452 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 GPR17Q13304 367 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 DNASE1L3Q13609 305 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 PFKFB4Q16877 469 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 GLYATQ6IB77 296 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 OR7D4Q8NG98 312 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 BRSK1Q8TDC3 778 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 NSMCE2Q96MF7 247 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 ANKRD12Q6UB98 2062 aa18.67■□□□□ 0.58
SNX4-201ENST00000251775 DEAF1O75398 565 aaPredicted RBP18.66■□□□□ 0.58
SNX4-201ENST00000251775 INMTO95050 263 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 EPOP01588 193 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 ZDHHC11BP0C7U3 371 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 MTHFD2P13995 350 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 GP2P55259 537 aaKnown RBP18.66■□□□□ 0.58
SNX4-201ENST00000251775 GABARAPL2P60520 117 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 UFM1P61960 85 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 ECT2LQ008S8 904 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 CTU2Q2VPK5 515 aaKnown RBP18.66■□□□□ 0.58
SNX4-201ENST00000251775 RTP2Q5QGT7 225 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 LAIR2Q6ISS4 152 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 SLCO6A1Q86UG4 719 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 SLC7A5P1Q8MH63 180 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 MFSD4AQ8N468 514 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 TMEM199Q8N511 208 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 SPATA17Q96L03 361 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 FAM118AQ9NWS6 357 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 RBMX2Q9Y388 322 aaKnown RBP18.66■□□□□ 0.58
SNX4-201ENST00000251775 PCDHB3Q9Y5E6 796 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 HTTP42858 3142 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 GBF1Q92538 1859 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 NT5C1B-RDH14C9J2C7 533 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 CYBBP04839 570 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 PRR35P0CG20 571 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 PCNAP12004 261 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 ZNF37AP17032 561 aaPredicted RBP18.66■□□□□ 0.58
SNX4-201ENST00000251775 EMX2Q04743 252 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 OR4D1Q15615 310 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 PGS1Q32NB8 556 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 MRNIPQ6NTE8 343 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 PEX13Q92968 403 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 AURKBQ96GD4 344 aaPredicted RBP18.66■□□□□ 0.58
SNX4-201ENST00000251775 TRIB3Q96RU7 358 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 MBOAT4Q96T53 435 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 KLHL25Q9H0H3 589 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 CATSPERZQ9NTU4 200 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 AIG1Q9NVV5 245 aa18.66■□□□□ 0.58
SNX4-201ENST00000251775 TYW5A2RUC4 315 aaKnown RBP18.65■□□□□ 0.58
SNX4-201ENST00000251775 CCDC154A6NI56 674 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 F5H5T6 163 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 PFDN6O15212 129 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 SERPINF2P08697 491 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 AGXTP21549 392 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 PCMT1P22061 227 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 PIGAP37287 484 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 RGRP47804 291 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 SLC11A1P49279 550 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 SUOXP51687 545 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 DSG4Q86SJ6 1040 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 ABI1Q8IZP0 508 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 OR4L1Q8NH43 312 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 S100ZQ8WXG8 99 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 ISG20Q96AZ6 181 aaKnown RBP18.65■□□□□ 0.58
SNX4-201ENST00000251775 EFHD2Q96C19 240 aaPredicted RBP18.65■□□□□ 0.58
SNX4-201ENST00000251775 AMBRA1Q9C0C7 1298 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 LEF1Q9UJU2 399 aaPredicted RBP18.65■□□□□ 0.58
SNX4-201ENST00000251775 SPO11Q9Y5K1 396 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 HPRP00739 348 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 ENO2P09104 434 aaPredicted RBP18.65■□□□□ 0.58
SNX4-201ENST00000251775 ITIH1P19827 911 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 TIGD2Q4W5G0 525 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 TTC23Q5W5X9 447 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 ALG1LQ6GMV1 187 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 FUT10Q6P4F1 479 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 RALGPS2Q86X27 583 aaPredicted RBP18.65■□□□□ 0.58
SNX4-201ENST00000251775 DTWD1Q8N5C7 304 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 CDKN2AIPNLQ96HQ2 116 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 SMURF2Q9HAU4 748 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 PCDH12Q9NPG4 1184 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 SCUBE2Q9NQ36 999 aa18.65■□□□□ 0.58
SNX4-201ENST00000251775 TBC1D4O60343 1298 aa18.64■□□□□ 0.57
SNX4-201ENST00000251775 TULP3O75386 442 aa18.64■□□□□ 0.57
SNX4-201ENST00000251775 NDST3O95803 873 aa18.64■□□□□ 0.57
SNX4-201ENST00000251775 ATF6P18850 670 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms