RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 BASP1P80723 227 aaKnown RBP20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 FOXM1Q08050 763 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 KRT33BQ14525 404 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 TAF1BQ53T94 588 aaPredicted RBP20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 CACHD1Q5VU97 1274 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 DRICH1Q6PGQ1 229 aaPredicted RBP20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 XKR5Q6UX68 686 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 CEACAM20Q6UY09 585 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 DTX1Q86Y01 620 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 CLDN19Q8N6F1 224 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 ZDHHC12Q96GR4 267 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 TEFMQ96QE5 360 aaKnown RBP20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 COG4Q9H9E3 785 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 CASS4Q9NQ75 786 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 SLC2A6Q9UGQ3 507 aa20.66■□□□□ 0.9
HCFC1R1-201ENST00000248089 EFSO43281 561 aa20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 KCNJ1P48048 391 aa20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 RHDQ02161 417 aa20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 KCTD19Q17RG1 926 aaPredicted RBP20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 KLHL35Q6PF15 583 aa20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 IL22RA1Q8N6P7 574 aa20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 OR13J1Q8NGT2 312 aa20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 SNRNP27Q8WVK2 155 aaKnown RBP20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.65■□□□□ 0.92e-6■■■■■ 54.9
HCFC1R1-201ENST00000248089 CCM2Q9BSQ5 444 aa20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 FBXO8Q9NRD0 319 aa20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 DRG1Q9Y295 367 aaKnown RBP20.65■□□□□ 0.9
HCFC1R1-201ENST00000248089 GOLGA6L3A6NEY3 463 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 ERVH48-1M5A8F1 160 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 POLR1CO15160 346 aaPredicted RBP20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 ADRA1DP25100 572 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 FOXN2P32314 431 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 LAMB3Q13751 1172 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 TSTD2Q5T7W7 516 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 AFTPHQ6ULP2 937 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 PRSS42Q7Z5A4 293 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 CACNA2D3Q8IZS8 1091 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 PPHLN1Q8NEY8 458 aaKnown RBP20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 SLC39A7Q92504 469 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 NKD1Q969G9 470 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 HDAC10Q969S8 669 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 RNF31Q96EP0 1072 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 RANBP9Q96S59 729 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 ZNF768Q9H5H4 540 aaKnown RBP20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 SIDT1Q9NXL6 827 aaKnown RBP20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 TCAF1Q9Y4C2 921 aa20.64■□□□□ 0.89
HCFC1R1-201ENST00000248089 C17orf113A0A1B0GUU1 675 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 TOX3O15405 576 aaPredicted RBP20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 RAD1O60671 282 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 GOT2P00505 430 aaKnown RBP20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 PRB1P04280 392 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 PSMA3P25788 255 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 PREPP48147 710 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 TERF1P54274 439 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 SESN2P58004 480 aaPredicted RBP20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 SH3BP2P78314 561 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 OOSP2Q86WS3 158 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 OR6P1Q8NGX9 317 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 ZNF778Q96MU6 729 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 ZPBPQ9BS86 351 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 KIR3DX1Q9H7L2 352 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 EIF2B3Q9NR50 452 aaKnown RBP20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 EPHA6Q9UF33 1036 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 SLC24A2Q9UI40 661 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 PCDHGA4Q9Y5G9 962 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 HEBP2Q9Y5Z4 205 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 PRSS21Q9Y6M0 314 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 COLEC10Q9Y6Z7 277 aa20.63■□□□□ 0.89
HCFC1R1-201ENST00000248089 ATRXP46100 2492 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 OR5K3A6NET4 321 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 IFRD1O00458 451 aaPredicted RBP20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 AP2A2O94973 939 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 NSG1P42857 185 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 ARCN1P48444 511 aaKnown RBP20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 PRAMEP78395 509 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 ITIH4Q14624 930 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 DNTTIP2Q5QJE6 756 aaKnown RBP20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 CAPRIN2Q6IMN6 1127 aaKnown RBP20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 ZNF449Q6P9G9 518 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 C4orf22Q6V702 233 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 PRELID2Q8N945 189 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 ZSCAN1Q8NBB4 408 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 ELMO2Q96JJ3 720 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 OR6C1Q96RD1 312 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 FERD3LQ96RJ6 166 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 RAB33BQ9H082 229 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 HOMER3Q9NSC5 361 aa20.62■□□□□ 0.89
HCFC1R1-201ENST00000248089 OR6C74A6NCV1 312 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 STK17BO94768 372 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 WT1P19544 449 aaPredicted RBP20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 NDUFS1P28331 727 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 PDHA2P29803 388 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 VPS41P49754 854 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 CRADDP78560 199 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 BRD3Q15059 726 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 TRIP13Q15645 432 aaPredicted RBP20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 ARMC6Q6NXE6 501 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 PCSK4Q6UW60 755 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 PACS1Q6VY07 963 aa20.61■□□□□ 0.89
HCFC1R1-201ENST00000248089 MS4A14Q96JA4 679 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms