RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 POT1Q9NUX5 634 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 PSMD13Q9UNM6 376 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 EFR3BQ9Y2G0 817 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 WDR37Q9Y2I8 494 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 CROCCQ5TZA2 2017 aa13.5□□□□□ -0.25
DDX39A-201ENST00000242776 hCG_1818297A0A087WSY0 165 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 C3orf70A6NLC5 250 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-201ENST00000242776 APOL1O14791 398 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 KMOO15229 486 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 SCRG1O75711 98 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 RECKO95980 971 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 PYGMP11217 842 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 CA4P22748 312 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 CDKN2BP42772 138 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 ARCN1P48444 511 aaKnown RBP13.49□□□□□ -0.25
DDX39A-201ENST00000242776 CLCNKAP51800 687 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 GPS2Q13227 327 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 PLCL1Q15111 1095 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 KHDC1Q4VXA5 237 aaKnown RBP13.49□□□□□ -0.25
DDX39A-201ENST00000242776 MAIP1Q8WWC4 291 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 EID2BQ96D98 161 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 ZNF514Q96K75 400 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-201ENST00000242776 RNF157Q96PX1 679 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 NAP1L3Q99457 506 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-201ENST00000242776 OSBPL8Q9BZF1 889 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 ASF1BQ9NVP2 202 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 SNX7Q9UNH6 387 aa13.49□□□□□ -0.25
DDX39A-201ENST00000242776 UBA6A0AVT1 1052 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 MATN3O15232 486 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CEP104O60308 925 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 TMEM63AO94886 807 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 TJP3O95049 919 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 IDSP22304 550 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CXCR5P32302 372 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CDK18Q07002 472 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 TAZQ16635 292 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 DNTTIP2Q5QJE6 756 aaKnown RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CCDC181Q5TID7 509 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 C1QL3Q5VWW1 255 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 KAZNQ674X7 775 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CYB5D1Q6P9G0 228 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 TRAPPC5Q8IUR0 188 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 ZNF547Q8IVP9 402 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 ENDOVQ8N8Q3 282 aaKnown RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 SLC38A9Q8NBW4 561 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 GDAP1Q8TB36 358 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 SEC14L1Q92503 715 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 GLYATL1Q969I3 302 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 SNRNP40Q96DI7 357 aaKnown RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 C5orf34Q96MH7 638 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 ZFYVE1Q9HBF4 777 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 WASH6PQ9NQA3 447 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 G3BP2Q9UN86 482 aaKnown RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CFAP20Q9Y6A4 193 aaKnown RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 DOPEY1Q5JWR5 2465 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 PCSK5Q92824 1860 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 ANKRD66B4E2M5 251 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CHUKO15111 745 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CPNE3O75131 537 aaKnown RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CDK14O94921 469 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 POU3F2P20265 443 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 PBLDP30039 288 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 ITGA1P56199 1179 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 ACY1Q03154 408 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 GALNT2Q10471 571 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 LAMB3Q13751 1172 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 TUBB2AQ13885 445 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 PCSK7Q16549 785 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 NCBP2-AS2Q69YL0 99 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 TIGD7Q6NT04 549 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-201ENST00000242776 ABRAXAS1Q6UWZ7 409 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CCNYQ8ND76 341 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 UBXN4Q92575 508 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 MAML1Q92585 1016 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 SLC41A2Q96JW4 573 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 PPM1MQ96MI6 270 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 LYSMD1Q96S90 227 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 TIMM29Q9BSF4 260 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 TUBB2BQ9BVA1 445 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 CEP41Q9BYV8 373 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 BPIFA1Q9NP55 256 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 SOHLH2Q9NX45 425 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 GPR83Q9NYM4 423 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 RNF14Q9UBS8 474 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 SLC5A6Q9Y289 635 aa13.48□□□□□ -0.25
DDX39A-201ENST00000242776 DIDO1Q9BTC0 2240 aaKnown RBP13.47□□□□□ -0.25
DDX39A-201ENST00000242776 ARHGAP10A1A4S6 786 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
DDX39A-201ENST00000242776 FANCGO15287 622 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 CST8O60676 142 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 JCHAINP01591 159 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 MMP2P08253 660 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 HALP42357 657 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 PLEKHN1Q494U1 663 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-201ENST00000242776 SLC9A4Q6AI14 798 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 AADACL2Q6P093 401 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 BBS12Q6ZW61 710 aa13.47□□□□□ -0.25
DDX39A-201ENST00000242776 BZW1Q7L1Q6 419 aaKnown RBP13.47□□□□□ -0.25
DDX39A-201ENST00000242776 SLC13A5Q86YT5 568 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-201ENST00000242776 RASGEF1CQ8N431 466 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms