RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FGRP09769 529 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 SPATA31C1P0DKV0 1188 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 IRF9Q00978 393 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 PTPN11Q06124 597 aaPredicted RBP12.72□□□□□ -0.37
VAMP4-201ENST00000236192 TATDN1Q6P1N9 297 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 LAPTM4BQ86VI4 370 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 IZUMO1Q8IYV9 350 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 KCTD7Q96MP8 289 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 LIN7BQ9HAP6 207 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 FBXO8Q9NRD0 319 aa12.72□□□□□ -0.37
VAMP4-201ENST00000236192 PGRMC2O15173 223 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 NUDT7P0C024 238 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 ERVFC1P60507 584 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 OTOP1Q7RTM1 612 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 FAM35AQ86V20 835 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 DCP1BQ8IZD4 617 aaKnown RBP12.71□□□□□ -0.37
VAMP4-201ENST00000236192 RBPMSQ93062 196 aaKnown RBP12.71□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF436Q9C0F3 470 aaPredicted RBP12.71□□□□□ -0.37
VAMP4-201ENST00000236192 CBY1Q9Y3M2 126 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 HRH3Q9Y5N1 445 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 PRORSD1PA6NEY8 169 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 KPNA5O15131 536 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 CYBBP04839 570 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 ALDH2P05091 517 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 CD6P30203 668 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 WEE1P30291 646 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
VAMP4-201ENST00000236192 RGS4P49798 205 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 PSMD4P55036 377 aaKnown RBP12.71□□□□□ -0.37
VAMP4-201ENST00000236192 GTF2BQ00403 316 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 GRM3Q14832 879 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 SZRD1Q7Z422 152 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 RETREG3Q86VR2 466 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 LDHDQ86WU2 507 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 HID1Q8IV36 788 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 FAM83FQ8NEG4 500 aaPredicted RBP12.71□□□□□ -0.37
VAMP4-201ENST00000236192 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 KCNN1Q92952 543 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 PPP3R2Q96LZ3 170 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 SLC9A7Q96T83 725 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 SMAD5Q99717 465 aaKnown RBP12.71□□□□□ -0.37
VAMP4-201ENST00000236192 KCNN2Q9H2S1 579 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 WWOXQ9NZC7 414 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 DHRS7Q9Y394 339 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 DAGLAQ9Y4D2 1042 aa12.71□□□□□ -0.37
VAMP4-201ENST00000236192 B4GAT1O43505 415 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 SLC22A5O76082 557 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 JCHAINP01591 159 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 TGM1P22735 817 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 GPR68Q15743 365 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 EEF1AKMT1Q8WVE0 214 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 TCTEX1D2Q8WW35 142 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 ST8SIA2Q92186 375 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 TMEM176AQ96HP8 235 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 ZBTB20Q9HC78 741 aaPredicted RBP12.71□□□□□ -0.38
VAMP4-201ENST00000236192 HCN2Q9UL51 889 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 KIAA0513O60268 411 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 JRKO75564 520 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 LDOC1O95751 146 aaPredicted RBP12.71□□□□□ -0.38
VAMP4-201ENST00000236192 GLP2RO95838 553 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.38
VAMP4-201ENST00000236192 NFKB1P19838 968 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 CHRM3P20309 590 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 CA5AP35218 305 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 ORC1Q13415 861 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 GPR65Q8IYL9 337 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 OR6C4Q8NGE1 309 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 ZFAND1Q8TCF1 268 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 COQ10AQ96MF6 247 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 WACQ9BTA9 647 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.38
VAMP4-201ENST00000236192 AKIP1Q9NQ31 210 aa12.71□□□□□ -0.38
VAMP4-201ENST00000236192 RIC1Q4ADV7 1423 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 A8MUA0 341 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 FAM25EA8MYX2 175 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 L1CAMP32004 1257 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 FEN1P39748 380 aaKnown RBP12.7□□□□□ -0.38
VAMP4-201ENST00000236192 RBP5P82980 135 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 SPIBQ01892 262 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 C19orf57Q0VDD7 668 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 ASB18Q6ZVZ8 466 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 GALNT13Q8IUC8 556 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 STAG3L4Q8TBR4 150 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 BRSK1Q8TDC3 778 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 ASPNQ9BXN1 380 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 KLHL21Q9UJP4 597 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
VAMP4-201ENST00000236192 LRCH4O75427 683 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 RAB2AP61019 212 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 OCLNQ16625 522 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 MAP1SQ66K74 1059 aaPredicted RBP12.7□□□□□ -0.38
VAMP4-201ENST00000236192 PRSS48Q7RTY5 328 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 NRARPQ7Z6K4 114 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 IL12RB2Q99665 862 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF302Q9NR11 478 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 SPASTQ9UBP0 616 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 PCDHGA8Q9Y5G5 932 aa12.7□□□□□ -0.38
VAMP4-201ENST00000236192 AKAP8O43823 692 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms