RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 MT-CO3P00414 261 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 FMO4P31512 558 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 SLC1A2P43004 574 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 CSE1LP55060 971 aaKnown RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 SPIDRQ14159 915 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 RPE65Q16518 533 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 SYTL3Q4VX76 610 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 TMPRSS12Q86WS5 348 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 ZBED8Q8IZ13 594 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 KRT222Q8N1A0 295 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 FBXO36Q8NEA4 188 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 FBXO25Q8TCJ0 367 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 LKAAEAR1Q8TD35 194 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 LPGAT1Q92604 370 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 ART4Q93070 314 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 TCF12Q99081 682 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 P2RY12Q9H244 342 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 LRRN3Q9H3W5 708 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 PLAC1Q9HBJ0 212 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 SAYSD1Q9NPB0 183 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 PPANQ9NQ55 473 aaKnown RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 KCNK4Q9NYG8 393 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 GNPTGQ9UJJ9 305 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 ANGPTL2Q9UKU9 493 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 ATXN7L1Q9ULK2 861 aaPredicted RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 CRYL1Q9Y2S2 319 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 A0A1W2PQM1 296 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 E7ESA3 106 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 GSTM1P09488 218 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 XRCC1P18887 633 aaPredicted RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 PDHA2P29803 388 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 MAPK9P45984 424 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 GSTM4Q03013 218 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 CAV1Q03135 178 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 TARDBPQ13148 414 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 ZNF658BQ4V348 819 aaPredicted RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 ZNF789Q5FWF6 425 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 NKAIN2Q5VXU1 208 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 DUS1LQ6P1R4 473 aaKnown RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 ZDHHC24Q6UX98 284 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 RBM44Q6ZP01 1051 aaKnown RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 CCDC25Q86WR0 208 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 LRRC6Q86X45 466 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 AVL9Q8NBF6 648 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 SH3KBP1Q96B97 665 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 RMDN2Q96LZ7 410 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 C12orf66Q96MD2 445 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 GFM1Q96RP9 751 aaKnown RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 INSM2Q96T92 566 aaPredicted RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 FAM167BQ9BTA0 163 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 TSSK1BQ9BXA7 367 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 FBXO6Q9NRD1 293 aaPredicted RBP14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 OGFRQ9NZT2 677 aa14.38□□□□□ -0.11
PCOLCE-201ENST00000223061 ATP8B1O43520 1251 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 S1PR4O95977 384 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 TUBBP07437 444 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 RPS3P23396 243 aaKnown RBP eCLIP14.37□□□□□ -0.116e-7■■■■■ 33.6
PCOLCE-201ENST00000223061 GPR3P46089 330 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 MPP1Q00013 466 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 NR1D2Q14995 579 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 CTSL3PQ5NE16 218 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 CDCP2Q5VXM1 449 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 ZNF449Q6P9G9 518 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 CAPN12Q6ZSI9 719 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 USP53Q70EK8 1073 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 WDR48Q8TAF3 677 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 CALML6Q8TD86 181 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 CERS2Q96G23 380 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 TBC1D10AQ9BXI6 508 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 ZMYND15Q9H091 742 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 RDH14Q9HBH5 336 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 EPB41L5Q9HCM4 733 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 POT1Q9NUX5 634 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 INTS10Q9NVR2 710 aaKnown RBP14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 FBXO5Q9UKT4 447 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 VPS9D1Q9Y2B5 631 aa14.37□□□□□ -0.11
PCOLCE-201ENST00000223061 IGHV1OR21-1A0A087WYE8 117 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 NTN3O00634 580 aaPredicted RBP14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 LIN7AO14910 233 aaPredicted RBP14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 ZW10O43264 779 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 CSO75390 466 aaKnown RBP14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 MTHFD1P11586 935 aaKnown RBP14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 CCR7P32248 378 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 SHC2P98077 582 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 KRT33BQ14525 404 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 MAP9Q49MG5 647 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 STEAP4Q687X5 459 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 TRMT10BQ6PF06 316 aaKnown RBP14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 LMNTD2Q8IXW0 634 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 DCBLD1Q8N8Z6 715 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 PYROXD1Q8WU10 500 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 FAM136AQ96C01 138 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 AHCYL2Q96HN2 611 aaKnown RBP14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 BIRC8Q96P09 236 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 DEPDC7Q96QD5 511 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 OR52A5Q9H2C5 316 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 SLC40A1Q9NP59 571 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 FAM53CQ9NYF3 392 aa14.36□□□□□ -0.11
PCOLCE-201ENST00000223061 SLC17A6Q9P2U8 582 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms