RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 TNPO3Q9Y5L0 923 aaKnown RBP21.87■■□□□ 1.09
CCDC9-201ENST00000221922 ZNF106Q9H2Y7 1883 aaKnown RBP21.87■■□□□ 1.09
CCDC9-201ENST00000221922 ZFC3H1O60293 1989 aaKnown RBP21.86■■□□□ 1.09
CCDC9-201ENST00000221922 CROCCQ5TZA2 2017 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 ACRP10323 421 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 CTPS1P17812 591 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 RPS3P23396 243 aaKnown RBP eCLIP21.86■■□□□ 1.093e-6■□□□□ 10.1
CCDC9-201ENST00000221922 GJA8P48165 433 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 CSNK1DP48730 415 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 NFYCQ13952 458 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 TGFBIQ15582 683 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 MPPE1Q53F39 396 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 FBXO48Q5FWF7 155 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 FRA10AC1Q70Z53 315 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 METTL3Q86U44 580 aaKnown RBP21.86■■□□□ 1.09
CCDC9-201ENST00000221922 HS6ST3Q8IZP7 471 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 TEX37Q96LM6 180 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 CLPBQ9H078 707 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 CD320Q9NPF0 282 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 OAZ3Q9UMX2 235 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 E2F3O00716 465 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 LINC00271P0C7V0 271 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 PFKLP17858 780 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 BCL2L1Q07817 233 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 PTRHD1Q6GMV3 140 aaKnown RBP21.86■■□□□ 1.09
CCDC9-201ENST00000221922 TTC33Q6PID6 262 aaPredicted RBP21.86■■□□□ 1.09
CCDC9-201ENST00000221922 APCDD1Q8J025 514 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 TM6SF2Q9BZW4 377 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 TMEM45AQ9NWC5 275 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 CIDEBQ9UHD4 219 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 EIF2B4Q9UI10 523 aaKnown RBP21.86■■□□□ 1.09
CCDC9-201ENST00000221922 ZNF225Q9UK10 706 aa21.86■■□□□ 1.09
CCDC9-201ENST00000221922 SCN8AQ9UQD0 1980 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 TRAV19A0A0A6YYK7 116 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 RNF103-CHMP3A0A140T963 221 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 DYTNA2CJ06 578 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 ZNF701M0R085 212 aaPredicted RBP21.85■■□□□ 1.09
CCDC9-201ENST00000221922 SOCS5O75159 536 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 S100BP04271 92 aaPredicted RBP21.85■■□□□ 1.09
CCDC9-201ENST00000221922 ALPIP09923 528 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 UMPSP11172 480 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 CA8P35219 290 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 EEFSECP57772 596 aaKnown RBP21.85■■□□□ 1.09
CCDC9-201ENST00000221922 LIPEQ05469 1076 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 DCTN2Q13561 401 aaKnown RBP21.85■■□□□ 1.09
CCDC9-201ENST00000221922 CYP51A1Q16850 503 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 PDCD4Q53EL6 469 aaKnown RBP21.85■■□□□ 1.09
CCDC9-201ENST00000221922 RABL3Q5HYI8 236 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 LYPLAL1Q5VWZ2 237 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 BBS7Q8IWZ6 715 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 RBFAQ8N0V3 343 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 BHMTQ93088 406 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 VPS33AQ96AX1 596 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 EID2BQ96D98 161 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 ZFYVE1Q9HBF4 777 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 GNPTGQ9UJJ9 305 aa21.85■■□□□ 1.09
CCDC9-201ENST00000221922 KANSL1LA0AUZ9 987 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 K7ERQ8 282 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 TPST1O60507 370 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 PRAMEF12O95522 483 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 C8AP07357 584 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 ITGALP20701 1170 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 PRDX3P30048 256 aaKnown RBP21.84■■□□□ 1.09
CCDC9-201ENST00000221922 PCBP2Q15366 365 aaKnown RBP eCLIP21.84■■□□□ 1.093e-8■■■□□ 16.3
CCDC9-201ENST00000221922 FXNQ16595 210 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 ZBED5Q49AG3 693 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 PAGE3Q5JUK9 113 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 SNX20Q7Z614 316 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 ZNF786Q8N393 782 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 DNAJB14Q8TBM8 379 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 KCTD14Q9BQ13 255 aaPredicted RBP21.84■■□□□ 1.09
CCDC9-201ENST00000221922 TRIM8Q9BZR9 551 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 LEF1Q9UJU2 399 aaPredicted RBP21.84■■□□□ 1.09
CCDC9-201ENST00000221922 HELZP42694 1942 aaKnown RBP21.84■■□□□ 1.09
CCDC9-201ENST00000221922 A0A0U1RQS6 177 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 INPP4BO15327 924 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 SLC22A3O75751 556 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 PRAMEF1O95521 474 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 TRBC1P01850 177 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 ADH1AP07327 375 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 MTHFD1P11586 935 aaKnown RBP21.84■■□□□ 1.09
CCDC9-201ENST00000221922 RPL10P27635 214 aaKnown RBP21.84■■□□□ 1.09
CCDC9-201ENST00000221922 RGS4P49798 205 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 EMP3P54852 163 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 ERVK-8P63133 956 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 DHRS4L2Q6PKH6 230 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 SERPINA9Q86WD7 417 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 KIAA2013Q8IYS2 634 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 ELMOD1Q8N336 334 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 CHCHD4Q8N4Q1 142 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 PAF1Q8N7H5 531 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 FIBINQ8TAL6 211 aa21.84■■□□□ 1.09
CCDC9-201ENST00000221922 KIAA1522Q9P206 1035 aaPredicted RBP21.84■■□□□ 1.09
CCDC9-201ENST00000221922 EVLQ9UI08 416 aaPredicted RBP21.84■■□□□ 1.09
CCDC9-201ENST00000221922 CXorf51AA0A1B0GTR3 108 aa21.83■■□□□ 1.09
CCDC9-201ENST00000221922 IQCF5A8MTL0 148 aa21.83■■□□□ 1.09
CCDC9-201ENST00000221922 NPPAP01160 153 aa21.83■■□□□ 1.09
CCDC9-201ENST00000221922 POLR2JP52435 117 aaKnown RBP21.83■■□□□ 1.09
CCDC9-201ENST00000221922 UFM1P61960 85 aa21.83■■□□□ 1.09
CCDC9-201ENST00000221922 ESRRGP62508 458 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms