RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 LEUTXA8MZ59 168 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 FXYD1O00168 92 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 NPHS1O60500 1241 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 KCNJ13O60928 360 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 CHRM5P08912 532 aaPredicted RBP14.46□□□□□ -0.09
PTPRA-201ENST00000216877 NCF1P14598 390 aaPredicted RBP14.46□□□□□ -0.09
PTPRA-201ENST00000216877 ZNF132P52740 706 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 ISL1P61371 349 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 TNFAIP1Q13829 316 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 FLYWCH1Q4VC44 716 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 ZMAT1Q5H9K5 638 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 VARS2Q5ST30 1063 aaKnown RBP14.46□□□□□ -0.09
PTPRA-201ENST00000216877 TSTD2Q5T7W7 516 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 PM20D1Q6GTS8 502 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 PLET1Q6UQ28 207 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 FAM217AQ8IXS0 508 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 ZBTB44Q8NCP5 570 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 NUDT8Q8WV74 236 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 RTP4Q96DX8 246 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 PPP1R16BQ96T49 567 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 LRRC4Q9HBW1 653 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 DIABLOQ9NR28 239 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 TSR3Q9UJK0 312 aaKnown RBP14.46□□□□□ -0.09
PTPRA-201ENST00000216877 MKLN1Q9UL63 735 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 PCDHA10Q9Y5I2 948 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 LYVE1Q9Y5Y7 322 aa14.46□□□□□ -0.09
PTPRA-201ENST00000216877 MAGEB16A2A368 324 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF682O95780 498 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ATF6P18850 670 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ERP29P30040 261 aaKnown RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 SOX9P48436 509 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 AP2S1P53680 142 aaPredicted RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 UFM1P61960 85 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 GNA13Q14344 377 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 STXBP2Q15833 593 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 PTCHD3Q3KNS1 767 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 B3GNT8Q7Z7M8 397 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 MICALL2Q8IY33 904 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 DCP1BQ8IZD4 617 aaKnown RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 MINDY1Q8N5J2 469 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 VANGL1Q8TAA9 524 aaPredicted RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 SLC47A1Q96FL8 570 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 RIPOR3Q96MK2 946 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 MRPL45Q9BRJ2 306 aaKnown RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ACOT13Q9NPJ3 140 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 SEMA4BQ9NPR2 832 aaPredicted RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 TSPAN16Q9UKR8 245 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 DGAT1O75907 488 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 GABARAPL2P60520 117 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 PFKFB4Q16877 469 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 TRIM71Q2Q1W2 868 aaKnown RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ARHGEF16Q5VV41 709 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 FAM131AQ6UXB0 335 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 CYS1Q717R9 158 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ADAMTSL2Q86TH1 951 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 LDB1Q86U70 411 aaPredicted RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 NLRP8Q86W28 1048 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 SIAH1Q8IUQ4 282 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 SETD9Q8NE22 299 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 OR6P1Q8NGX9 317 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 TWIST2Q8WVJ9 160 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 SLC38A4Q969I6 547 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 PTERQ96BW5 349 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 FRMD6Q96NE9 622 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 TAAR1Q96RJ0 339 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ITPAQ9BY32 194 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 FARSBQ9NSD9 589 aaKnown RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 MAGEA6P43360 314 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 UGT3A2Q3SY77 523 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF648Q5T619 568 aaPredicted RBP14.45□□□□□ -0.1
PTPRA-201ENST00000216877 SULF1Q8IWU6 871 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 FAM126BQ8IXS8 530 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 CLYBLQ8N0X4 340 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 DTWD1Q8N5C7 304 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 CHAC2Q8WUX2 184 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 TESCQ96BS2 214 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 MBOAT4Q96T53 435 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF670Q9BS34 389 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 UGT2B28Q9BY64 529 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 MEAF6Q9HAF1 191 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 ANKEF1Q9NU02 776 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 MALT1Q9UDY8 824 aa14.45□□□□□ -0.1
PTPRA-201ENST00000216877 JCHAINP01591 159 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 NUDT1P36639 197 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 PRIM2P49643 509 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 FCGRTP55899 365 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 ENPEPQ07075 957 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 TARDBPQ13148 414 aaKnown RBP eCLIP14.44□□□□□ -0.11e-12■■■■■ 41.8
PTPRA-201ENST00000216877 TMPRSS11AQ6ZMR5 421 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 ILDR2Q71H61 639 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 LPAR1Q92633 364 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 CDADC1Q9BWV3 514 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 DYRK4Q9NR20 520 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 COL20A1Q9P218 1284 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 NAV1Q8NEY1 1877 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 ZCWPW2A0A1B0GU75 182 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 A0A1W2PQ09 198 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms